Gene : Glyma.01G018400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11514:SF43 - TRANSCRIPTION FACTOR MYC3-RELATED Genomic Order:  184
Name:  ? Glyma.01G018400 Secondary Identifier:  ? PAC:30544432
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G018400 0.5kb upstream 0.5kb upstream 2473 true Chr01: 1772397-1774869 Glycine max
Glyma.01G018400 0.5kb upstream 0.5kb upstream 500 false Chr01: 1772397-1772896 Glycine max
Glyma.01G018400 0.5kb downstream 0.5kb downstream 2473 true Chr01: 1772897-1775369 Glycine max
Glyma.01G018400 0.5kb downstream 0.5kb downstream 500 false Chr01: 1774870-1775369 Glycine max
Glyma.01G018400 1.0kb upstream 1.0kb upstream 2973 true Chr01: 1771897-1774869 Glycine max
Glyma.01G018400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1771897-1772896 Glycine max
Glyma.01G018400 1.0kb downstream 1.0kb downstream 2973 true Chr01: 1772897-1775869 Glycine max
Glyma.01G018400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1774870-1775869 Glycine max
Glyma.01G018400 2.0kb upstream 2.0kb upstream 3973 true Chr01: 1770897-1774869 Glycine max
Glyma.01G018400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1770897-1772896 Glycine max
Glyma.01G018400 2.0kb downstream 2.0kb downstream 3973 true Chr01: 1772897-1776869 Glycine max
Glyma.01G018400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1774870-1776869 Glycine max
Glyma.01G018400 5.0kb upstream 5.0kb upstream 6973 true Chr01: 1767897-1774869 Glycine max
Glyma.01G018400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1767897-1772896 Glycine max
Glyma.01G018400 5.0kb downstream 5.0kb downstream 6973 true Chr01: 1772897-1779869 Glycine max
Glyma.01G018400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1774870-1779869 Glycine max
Glyma.01G018400 10.0kb upstream 10.0kb upstream 11973 true Chr01: 1762897-1774869 Glycine max
Glyma.01G018400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1762897-1772896 Glycine max
Glyma.01G018400 10.0kb downstream 10.0kb downstream 11973 true Chr01: 1772897-1784869 Glycine max
Glyma.01G018400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1774870-1784869 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030331 5273 Angiosperm View MSA
122245070 5265 Fabidae Singleton cluster - no MSA
123989273 5270 Rosid Singleton cluster - no MSA
123564395 5271 Pentapetalae Singleton cluster - no MSA
122599165 5272 Eudicot Singleton cluster - no MSA
121351644 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.1258 0.0 77.363 High High
cufflinks 14.6676 0.0 39.1375    
cufflinks 28.0131 0.0 76.461 High High
cufflinks 12.4665 0.0 33.2731    
cufflinks 17.5974 0.0 47.2283    
cufflinks 10.7997 0.0 28.8723   Low
cufflinks 10.6999 0.0 28.6039   Low
cufflinks 17.0464 0.0 45.6134    
cufflinks 13.2685 0.0 35.3986    
cufflinks 80.397     High High
cufflinks 23.339     High  
cufflinks 51.062     High  
cufflinks 16.825     High Low
cufflinks 9.432     High Low
cufflinks 49.636     High  
cufflinks 33.831     High  
cufflinks 112.658     High High
cufflinks 43.403     High  
cufflinks 32.631     High  
cufflinks 24.607     High  
cufflinks 20.985     High  
cufflinks 30.427     High  
cufflinks 54.273     High  
cufflinks 27.747     High  
cufflinks 22.305     High  
cufflinks 35.49     High  

0 Strain