Gene : Glyma.01G131400 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR11480 - SAPOSIN-RELATED Genomic Order:  1314
Name:  ? Glyma.01G131400 Secondary Identifier:  ? PAC:30542521
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G131400 0.5kb upstream 0.5kb upstream 5823 true Chr01: 44778056-44783878 Glycine max
Glyma.01G131400 0.5kb upstream 0.5kb upstream 500 false Chr01: 44778056-44778555 Glycine max
Glyma.01G131400 0.5kb downstream 0.5kb downstream 5823 true Chr01: 44778556-44784378 Glycine max
Glyma.01G131400 0.5kb downstream 0.5kb downstream 500 false Chr01: 44783879-44784378 Glycine max
Glyma.01G131400 1.0kb upstream 1.0kb upstream 6323 true Chr01: 44777556-44783878 Glycine max
Glyma.01G131400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 44777556-44778555 Glycine max
Glyma.01G131400 1.0kb downstream 1.0kb downstream 6323 true Chr01: 44778556-44784878 Glycine max
Glyma.01G131400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 44783879-44784878 Glycine max
Glyma.01G131400 2.0kb upstream 2.0kb upstream 7323 true Chr01: 44776556-44783878 Glycine max
Glyma.01G131400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 44776556-44778555 Glycine max
Glyma.01G131400 2.0kb downstream 2.0kb downstream 7323 true Chr01: 44778556-44785878 Glycine max
Glyma.01G131400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 44783879-44785878 Glycine max
Glyma.01G131400 5.0kb upstream 5.0kb upstream 10323 true Chr01: 44773556-44783878 Glycine max
Glyma.01G131400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 44773556-44778555 Glycine max
Glyma.01G131400 5.0kb downstream 5.0kb downstream 10323 true Chr01: 44778556-44788878 Glycine max
Glyma.01G131400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 44783879-44788878 Glycine max
Glyma.01G131400 10.0kb upstream 10.0kb upstream 15323 true Chr01: 44768556-44783878 Glycine max
Glyma.01G131400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 44768556-44778555 Glycine max
Glyma.01G131400 10.0kb downstream 10.0kb downstream 15323 true Chr01: 44778556-44793878 Glycine max
Glyma.01G131400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 44783879-44793878 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298522 5265 Fabidae View MSA
124060450 5270 Rosid View MSA
123741391 5271 Pentapetalae View MSA
122770041 5272 Eudicot View MSA
122042315 5273 Angiosperm View MSA
121348484 5274 Embryophyte View MSA
123425718 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0746125 0.0 0.316728 Low Low
cufflinks 5.95109 0.0 18.9356    
cufflinks 10.9945 0.0 44.6616    
cufflinks 0.90024 0.0 4.37316    
cufflinks 15.0807 0.0 62.0226    
cufflinks 0.228967 0.0 0.905147 Low  
cufflinks 0.0217301 0.0 0.114104 Low Low
cufflinks 0.399844 0.0 1.9965    
cufflinks 58.4081 0.0 225.771 High High
cufflinks 0.027     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.248        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 3.12       High
cufflinks 0.06     Low  
cufflinks 0.004     Low Low
cufflinks 0.26        
cufflinks 0.231        
cufflinks 0.042     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.045     Low  
cufflinks 0.091     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.053     Low  
cufflinks 0.001     Low Low

0 Strain