Gene : Glyma.01G177000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31189:SF7 - CUPIN FAMILY PROTEIN Genomic Order:  1770
Name:  ? Glyma.01G177000 Secondary Identifier:  ? PAC:30544485
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G177000 0.5kb upstream 0.5kb upstream 3172 true Chr01: 51350796-51353967 Glycine max
Glyma.01G177000 0.5kb upstream 0.5kb upstream 500 false Chr01: 51350796-51351295 Glycine max
Glyma.01G177000 0.5kb downstream 0.5kb downstream 3172 true Chr01: 51351296-51354467 Glycine max
Glyma.01G177000 0.5kb downstream 0.5kb downstream 500 false Chr01: 51353968-51354467 Glycine max
Glyma.01G177000 1.0kb upstream 1.0kb upstream 3672 true Chr01: 51350296-51353967 Glycine max
Glyma.01G177000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 51350296-51351295 Glycine max
Glyma.01G177000 1.0kb downstream 1.0kb downstream 3672 true Chr01: 51351296-51354967 Glycine max
Glyma.01G177000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 51353968-51354967 Glycine max
Glyma.01G177000 2.0kb upstream 2.0kb upstream 4672 true Chr01: 51349296-51353967 Glycine max
Glyma.01G177000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 51349296-51351295 Glycine max
Glyma.01G177000 2.0kb downstream 2.0kb downstream 4672 true Chr01: 51351296-51355967 Glycine max
Glyma.01G177000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 51353968-51355967 Glycine max
Glyma.01G177000 5.0kb upstream 5.0kb upstream 7672 true Chr01: 51346296-51353967 Glycine max
Glyma.01G177000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 51346296-51351295 Glycine max
Glyma.01G177000 5.0kb downstream 5.0kb downstream 7672 true Chr01: 51351296-51358967 Glycine max
Glyma.01G177000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 51353968-51358967 Glycine max
Glyma.01G177000 10.0kb upstream 10.0kb upstream 12672 true Chr01: 51341296-51353967 Glycine max
Glyma.01G177000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 51341296-51351295 Glycine max
Glyma.01G177000 10.0kb downstream 10.0kb downstream 12672 true Chr01: 51351296-51363967 Glycine max
Glyma.01G177000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 51353968-51363967 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307831 5265 Fabidae View MSA
124064948 5270 Rosid View MSA
123752379 5271 Pentapetalae View MSA
122792319 5272 Eudicot View MSA
122046827 5273 Angiosperm View MSA
121310665 5274 Embryophyte View MSA
123348093 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.00652506 0.0 0.0295097 Low  
cufflinks 0.00650652 0.0 0.0295072 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0103347 0.0 0.0447653 Low  
cufflinks 0.00555804 0.0 0.0255346 Low  
cufflinks 0.137592 0.0 0.524899 Low  
cufflinks 290.029 0.0 1479.4 High High
cufflinks 0.00634874 0.0 0.0287341 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.007     Low  
cufflinks 1.54       High
cufflinks 0.059     Low  
cufflinks 0.4        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.07        
cufflinks 8.167     High High
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain