Gene : Glyma.01G173800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR22849:SF40 - U-BOX DOMAIN-CONTAINING PROTEIN 5 Genomic Order:  1738
Name:  ? Glyma.01G173800 Secondary Identifier:  ? PAC:30544881
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G173800 0.5kb upstream 0.5kb upstream 7005 true Chr01: 51067613-51074617 Glycine max
Glyma.01G173800 0.5kb upstream 0.5kb upstream 500 false Chr01: 51074118-51074617 Glycine max
Glyma.01G173800 0.5kb downstream 0.5kb downstream 7005 true Chr01: 51067113-51074117 Glycine max
Glyma.01G173800 0.5kb downstream 0.5kb downstream 500 false Chr01: 51067113-51067612 Glycine max
Glyma.01G173800 1.0kb upstream 1.0kb upstream 7505 true Chr01: 51067613-51075117 Glycine max
Glyma.01G173800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 51074118-51075117 Glycine max
Glyma.01G173800 1.0kb downstream 1.0kb downstream 7505 true Chr01: 51066613-51074117 Glycine max
Glyma.01G173800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 51066613-51067612 Glycine max
Glyma.01G173800 2.0kb upstream 2.0kb upstream 8505 true Chr01: 51067613-51076117 Glycine max
Glyma.01G173800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 51074118-51076117 Glycine max
Glyma.01G173800 2.0kb downstream 2.0kb downstream 8505 true Chr01: 51065613-51074117 Glycine max
Glyma.01G173800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 51065613-51067612 Glycine max
Glyma.01G173800 5.0kb upstream 5.0kb upstream 11505 true Chr01: 51067613-51079117 Glycine max
Glyma.01G173800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 51074118-51079117 Glycine max
Glyma.01G173800 5.0kb downstream 5.0kb downstream 11505 true Chr01: 51062613-51074117 Glycine max
Glyma.01G173800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 51062613-51067612 Glycine max
Glyma.01G173800 10.0kb upstream 10.0kb upstream 16505 true Chr01: 51067613-51084117 Glycine max
Glyma.01G173800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 51074118-51084117 Glycine max
Glyma.01G173800 10.0kb downstream 10.0kb downstream 16505 true Chr01: 51057613-51074117 Glycine max
Glyma.01G173800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 51057613-51067612 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308214 5265 Fabidae View MSA
124065910 5270 Rosid View MSA
123743713 5271 Pentapetalae View MSA
122796921 5272 Eudicot View MSA
122048855 5273 Angiosperm View MSA
121345281 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.39434 0.0 12.1403   High
cufflinks 0.0262346 0.0 0.107031 Low  
cufflinks 0.195914 0.0 0.73511 Low  
cufflinks 0.0146557 0.0 0.0620488 Low Low
cufflinks 0.923599 0.0 3.12005    
cufflinks 1.84347 0.0 5.64988    
cufflinks 0.00624999 0.0 0.0286262 Low Low
cufflinks 0.194929 0.0 0.732567 Low  
cufflinks 1.64972 0.0 5.13483    
cufflinks 0.051     Low  
cufflinks 2.91       High
cufflinks 0.09     Low  
cufflinks 0.143        
cufflinks 0.019     Low Low
cufflinks 1.29        
cufflinks 0.13        
cufflinks 5.361       High
cufflinks 0.057     Low  
cufflinks 0.017     Low Low
cufflinks 0.148        
cufflinks 2.878       High
cufflinks 0.239        
cufflinks 0.084     Low  
cufflinks 4.046       High
cufflinks 0.082     Low  
cufflinks 5.996       High

0 Strain