Gene : Glyma.01G170000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR24286:SF79 - 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE Genomic Order:  1700
Name:  ? Glyma.01G170000 Secondary Identifier:  ? PAC:30542931
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G170000 0.5kb upstream 0.5kb upstream 7801 true Chr01: 50742509-50750309 Glycine max
Glyma.01G170000 0.5kb upstream 0.5kb upstream 500 false Chr01: 50742509-50743008 Glycine max
Glyma.01G170000 0.5kb downstream 0.5kb downstream 7801 true Chr01: 50743009-50750809 Glycine max
Glyma.01G170000 0.5kb downstream 0.5kb downstream 500 false Chr01: 50750310-50750809 Glycine max
Glyma.01G170000 1.0kb upstream 1.0kb upstream 8301 true Chr01: 50742009-50750309 Glycine max
Glyma.01G170000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50742009-50743008 Glycine max
Glyma.01G170000 1.0kb downstream 1.0kb downstream 8301 true Chr01: 50743009-50751309 Glycine max
Glyma.01G170000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50750310-50751309 Glycine max
Glyma.01G170000 2.0kb upstream 2.0kb upstream 9301 true Chr01: 50741009-50750309 Glycine max
Glyma.01G170000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50741009-50743008 Glycine max
Glyma.01G170000 2.0kb downstream 2.0kb downstream 9301 true Chr01: 50743009-50752309 Glycine max
Glyma.01G170000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50750310-50752309 Glycine max
Glyma.01G170000 5.0kb upstream 5.0kb upstream 12301 true Chr01: 50738009-50750309 Glycine max
Glyma.01G170000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50738009-50743008 Glycine max
Glyma.01G170000 5.0kb downstream 5.0kb downstream 12301 true Chr01: 50743009-50755309 Glycine max
Glyma.01G170000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50750310-50755309 Glycine max
Glyma.01G170000 10.0kb upstream 10.0kb upstream 17301 true Chr01: 50733009-50750309 Glycine max
Glyma.01G170000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50733009-50743008 Glycine max
Glyma.01G170000 10.0kb downstream 10.0kb downstream 17301 true Chr01: 50743009-50760309 Glycine max
Glyma.01G170000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50750310-50760309 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121613991 5273 Angiosperm Singleton cluster - no MSA
122248205 5265 Fabidae Singleton cluster - no MSA
123991846 5270 Rosid Singleton cluster - no MSA
123566767 5271 Pentapetalae Singleton cluster - no MSA
122601522 5272 Eudicot Singleton cluster - no MSA
120886202 5274 Embryophyte Singleton cluster - no MSA
122926973 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.117085 0.0 0.458536 Low Low
cufflinks 1.73426 0.0 5.70122   High
cufflinks 0.18019 0.0 0.692575 Low  
cufflinks 1.70276 0.0 5.60366   High
cufflinks 0.172993 0.0 0.666957 Low  
cufflinks 0.334969 0.0 1.25358    
cufflinks 1.15506 0.0 3.98903   High
cufflinks 0.134455 0.0 0.523341 Low  
cufflinks 0.2974 0.0 1.11909    
cufflinks 0.258       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.851        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.248       Low
cufflinks 0.979        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 5.577       High
cufflinks 0.3       Low
cufflinks 1.085        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.253        
cufflinks 0.924        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.086        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain