Gene : Glyma.01G148700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12197:SF138 - SET AND MYND DOMAIN-CONTAINING PROTEIN DDB_G0292140 Genomic Order:  1487
Name:  ? Glyma.01G148700 Secondary Identifier:  ? PAC:30542092
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G148700 0.5kb upstream 0.5kb upstream 2297 true Chr01: 48578085-48580381 Glycine max
Glyma.01G148700 0.5kb upstream 0.5kb upstream 500 false Chr01: 48579882-48580381 Glycine max
Glyma.01G148700 0.5kb downstream 0.5kb downstream 2297 true Chr01: 48577585-48579881 Glycine max
Glyma.01G148700 0.5kb downstream 0.5kb downstream 500 false Chr01: 48577585-48578084 Glycine max
Glyma.01G148700 1.0kb upstream 1.0kb upstream 2797 true Chr01: 48578085-48580881 Glycine max
Glyma.01G148700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 48579882-48580881 Glycine max
Glyma.01G148700 1.0kb downstream 1.0kb downstream 2797 true Chr01: 48577085-48579881 Glycine max
Glyma.01G148700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 48577085-48578084 Glycine max
Glyma.01G148700 2.0kb upstream 2.0kb upstream 3797 true Chr01: 48578085-48581881 Glycine max
Glyma.01G148700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 48579882-48581881 Glycine max
Glyma.01G148700 2.0kb downstream 2.0kb downstream 3797 true Chr01: 48576085-48579881 Glycine max
Glyma.01G148700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 48576085-48578084 Glycine max
Glyma.01G148700 5.0kb upstream 5.0kb upstream 6797 true Chr01: 48578085-48584881 Glycine max
Glyma.01G148700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 48579882-48584881 Glycine max
Glyma.01G148700 5.0kb downstream 5.0kb downstream 6797 true Chr01: 48573085-48579881 Glycine max
Glyma.01G148700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 48573085-48578084 Glycine max
Glyma.01G148700 10.0kb upstream 10.0kb upstream 11797 true Chr01: 48578085-48589881 Glycine max
Glyma.01G148700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 48579882-48589881 Glycine max
Glyma.01G148700 10.0kb downstream 10.0kb downstream 11797 true Chr01: 48568085-48579881 Glycine max
Glyma.01G148700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 48568085-48578084 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305711 5265 Fabidae View MSA
124065059 5270 Rosid View MSA
123739236 5271 Pentapetalae View MSA
122790735 5272 Eudicot View MSA
122047445 5273 Angiosperm View MSA
121345734 5274 Embryophyte View MSA
123425197 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.474198 0.0 1.77597   Low
cufflinks 22.851 0.0 60.9734 High  
cufflinks 2.18575 0.0 7.24795   Low
cufflinks 11.0335 0.0 30.1161    
cufflinks 29.7791 0.0 79.7752 High  
cufflinks 18.0848 0.0 48.3485    
cufflinks 42.1641 0.0 114.968 High  
cufflinks 46.8038 0.0 129.13 High  
cufflinks 26.9272 0.0 72.02 High  
cufflinks 16.749     High High
cufflinks 0.169       Low
cufflinks 5.904        
cufflinks 12.989     High High
cufflinks 10.794     High High
cufflinks 1.011        
cufflinks 1.814        
cufflinks 0.537        
cufflinks 4.254        
cufflinks 22.071     High High
cufflinks 0.559        
cufflinks 0.407        
cufflinks 1.108        
cufflinks 4.464        
cufflinks 0.183       Low
cufflinks 1.283        
cufflinks 0.581        

0 Strain