Gene : Glyma.01G147600 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  1476
Name:  ? Glyma.01G147600 Secondary Identifier:  ? PAC:30543298
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G147600 0.5kb upstream 0.5kb upstream 1710 true Chr01: 48431280-48432989 Glycine max
Glyma.01G147600 0.5kb upstream 0.5kb upstream 500 false Chr01: 48431280-48431779 Glycine max
Glyma.01G147600 0.5kb downstream 0.5kb downstream 1710 true Chr01: 48431780-48433489 Glycine max
Glyma.01G147600 0.5kb downstream 0.5kb downstream 500 false Chr01: 48432990-48433489 Glycine max
Glyma.01G147600 1.0kb upstream 1.0kb upstream 2210 true Chr01: 48430780-48432989 Glycine max
Glyma.01G147600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 48430780-48431779 Glycine max
Glyma.01G147600 1.0kb downstream 1.0kb downstream 2210 true Chr01: 48431780-48433989 Glycine max
Glyma.01G147600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 48432990-48433989 Glycine max
Glyma.01G147600 2.0kb upstream 2.0kb upstream 3210 true Chr01: 48429780-48432989 Glycine max
Glyma.01G147600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 48429780-48431779 Glycine max
Glyma.01G147600 2.0kb downstream 2.0kb downstream 3210 true Chr01: 48431780-48434989 Glycine max
Glyma.01G147600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 48432990-48434989 Glycine max
Glyma.01G147600 5.0kb upstream 5.0kb upstream 6210 true Chr01: 48426780-48432989 Glycine max
Glyma.01G147600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 48426780-48431779 Glycine max
Glyma.01G147600 5.0kb downstream 5.0kb downstream 6210 true Chr01: 48431780-48437989 Glycine max
Glyma.01G147600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 48432990-48437989 Glycine max
Glyma.01G147600 10.0kb upstream 10.0kb upstream 11210 true Chr01: 48421780-48432989 Glycine max
Glyma.01G147600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 48421780-48431779 Glycine max
Glyma.01G147600 10.0kb downstream 10.0kb downstream 11210 true Chr01: 48431780-48442989 Glycine max
Glyma.01G147600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 48432990-48442989 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122248160 5265 Fabidae Singleton cluster - no MSA
124041590 5270 Rosid View MSA
123746579 5271 Pentapetalae View MSA
122788130 5272 Eudicot View MSA
122049485 5273 Angiosperm View MSA
121351578 5274 Embryophyte View MSA
123382234 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.514002 0.0 1.94048   Low
cufflinks 2.52803 0.0 8.61857   High
cufflinks 0.970407 0.0 3.57548    
cufflinks 2.09893 0.0 7.29174    
cufflinks 1.96821 0.0 6.80478    
cufflinks 1.34779 0.0 4.82522    
cufflinks 0.403492 0.0 1.53759   Low
cufflinks 2.83921 0.0 9.52814   High
cufflinks 0.715026 0.0 2.659    
cufflinks 4.474       High
cufflinks 0.06       Low
cufflinks 1.587        
cufflinks 1.165        
cufflinks 0.653        
cufflinks 0.017     Low Low
cufflinks 0.518        
cufflinks 1.496        
cufflinks 1.227        
cufflinks 1.057        
cufflinks 0.203        
cufflinks 0.139        
cufflinks 0.597        
cufflinks 0.72        
cufflinks 0.015     Low Low
cufflinks 0.359        
cufflinks 0.444        

0 Strain