Gene : Glyma.01G117900 G. max Wm82.a2.v1
Defline:  (1 of 62) PF00954//PF01453//PF07714//PF08276 - S-locus glycoprotein domain (S_locus_glycop) // D-mannose binding lectin (B_lectin) // Protein tyrosine kinase (Pkinase_Tyr) // PAN-like domain (PAN_2) Genomic Order:  1179
Name:  ? Glyma.01G117900 Secondary Identifier:  ? PAC:30544527
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G117900 0.5kb upstream 0.5kb upstream 10535 true Chr01: 40636080-40646614 Glycine max
Glyma.01G117900 0.5kb upstream 0.5kb upstream 500 false Chr01: 40646115-40646614 Glycine max
Glyma.01G117900 0.5kb downstream 0.5kb downstream 10535 true Chr01: 40635580-40646114 Glycine max
Glyma.01G117900 0.5kb downstream 0.5kb downstream 500 false Chr01: 40635580-40636079 Glycine max
Glyma.01G117900 1.0kb upstream 1.0kb upstream 11035 true Chr01: 40636080-40647114 Glycine max
Glyma.01G117900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 40646115-40647114 Glycine max
Glyma.01G117900 1.0kb downstream 1.0kb downstream 11035 true Chr01: 40635080-40646114 Glycine max
Glyma.01G117900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 40635080-40636079 Glycine max
Glyma.01G117900 2.0kb upstream 2.0kb upstream 12035 true Chr01: 40636080-40648114 Glycine max
Glyma.01G117900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 40646115-40648114 Glycine max
Glyma.01G117900 2.0kb downstream 2.0kb downstream 12035 true Chr01: 40634080-40646114 Glycine max
Glyma.01G117900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 40634080-40636079 Glycine max
Glyma.01G117900 5.0kb upstream 5.0kb upstream 15035 true Chr01: 40636080-40651114 Glycine max
Glyma.01G117900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 40646115-40651114 Glycine max
Glyma.01G117900 5.0kb downstream 5.0kb downstream 15035 true Chr01: 40631080-40646114 Glycine max
Glyma.01G117900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 40631080-40636079 Glycine max
Glyma.01G117900 10.0kb upstream 10.0kb upstream 20035 true Chr01: 40636080-40656114 Glycine max
Glyma.01G117900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 40646115-40656114 Glycine max
Glyma.01G117900 10.0kb downstream 10.0kb downstream 20035 true Chr01: 40626080-40646114 Glycine max
Glyma.01G117900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 40626080-40636079 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121617733 5273 Angiosperm View MSA
122254012 5265 Fabidae View MSA
123996359 5270 Rosid View MSA
123570845 5271 Pentapetalae View MSA
122605578 5272 Eudicot View MSA
120889872 5274 Embryophyte View MSA
122930586 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.60717 0.0 31.1548   High
cufflinks 1.3253 0.0 8.23303    
cufflinks 5.93395 0.0 32.7297   High
cufflinks 2.47529 0.0 14.7311    
cufflinks 0.340467 0.0 2.99484   Low
cufflinks 0.345246 0.0 2.36284   Low
cufflinks 0.320962 0.0 1.95988   Low
cufflinks 1.8982 0.0 12.2193    
cufflinks 2.28344 0.0 14.0209    
cufflinks 0.016     Low  
cufflinks 0.01     Low  
cufflinks 0.125       High
cufflinks 0.012     Low  
cufflinks 0.001     Low Low
cufflinks 0.013     Low  
cufflinks 0.052     Low  
cufflinks 0.034     Low  
cufflinks 0.071     Low High
cufflinks 0.034     Low  
cufflinks 0.03     Low  
cufflinks 0.012     Low  
cufflinks 0.063     Low  
cufflinks 0.045     Low  
cufflinks 0.021     Low  
cufflinks 0.03     Low  
cufflinks 0.02     Low  

0 Strain