Gene : Glyma.01G121400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR15245//PTHR15245:SF25 - SYMPLEKIN-RELATED Genomic Order:  1214
Name:  ? Glyma.01G121400 Secondary Identifier:  ? PAC:30544994
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G121400 0.5kb upstream 0.5kb upstream 21071 true Chr01: 41808055-41829125 Glycine max
Glyma.01G121400 0.5kb upstream 0.5kb upstream 500 false Chr01: 41828626-41829125 Glycine max
Glyma.01G121400 0.5kb downstream 0.5kb downstream 21071 true Chr01: 41807555-41828625 Glycine max
Glyma.01G121400 0.5kb downstream 0.5kb downstream 500 false Chr01: 41807555-41808054 Glycine max
Glyma.01G121400 1.0kb upstream 1.0kb upstream 21571 true Chr01: 41808055-41829625 Glycine max
Glyma.01G121400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 41828626-41829625 Glycine max
Glyma.01G121400 1.0kb downstream 1.0kb downstream 21571 true Chr01: 41807055-41828625 Glycine max
Glyma.01G121400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 41807055-41808054 Glycine max
Glyma.01G121400 2.0kb upstream 2.0kb upstream 22571 true Chr01: 41808055-41830625 Glycine max
Glyma.01G121400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 41828626-41830625 Glycine max
Glyma.01G121400 2.0kb downstream 2.0kb downstream 22571 true Chr01: 41806055-41828625 Glycine max
Glyma.01G121400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 41806055-41808054 Glycine max
Glyma.01G121400 5.0kb upstream 5.0kb upstream 25571 true Chr01: 41808055-41833625 Glycine max
Glyma.01G121400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 41828626-41833625 Glycine max
Glyma.01G121400 5.0kb downstream 5.0kb downstream 25571 true Chr01: 41803055-41828625 Glycine max
Glyma.01G121400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 41803055-41808054 Glycine max
Glyma.01G121400 10.0kb upstream 10.0kb upstream 30571 true Chr01: 41808055-41838625 Glycine max
Glyma.01G121400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 41828626-41838625 Glycine max
Glyma.01G121400 10.0kb downstream 10.0kb downstream 30571 true Chr01: 41798055-41828625 Glycine max
Glyma.01G121400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 41798055-41808054 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305443 5265 Fabidae View MSA
124064902 5270 Rosid View MSA
123745431 5271 Pentapetalae View MSA
122791448 5272 Eudicot View MSA
122046301 5273 Angiosperm View MSA
121344612 5274 Embryophyte View MSA
123424208 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.84048 0.0 32.7266    
cufflinks 7.09732 0.0 26.5282    
cufflinks 10.2867 0.0 39.4491   High
cufflinks 7.26448 0.0 27.6548    
cufflinks 6.04485 0.0 25.3293    
cufflinks 3.25054 0.0 11.5811   Low
cufflinks 8.11709 0.0 30.4489    
cufflinks 4.80353 0.0 18.5552    
cufflinks 5.99925 0.0 22.6269    
cufflinks 0.4       Low
cufflinks 0.425        
cufflinks 0.777        
cufflinks 0.435        
cufflinks 0.468        
cufflinks 0.699        
cufflinks 0.736        
cufflinks 0.363       Low
cufflinks 0.795        
cufflinks 0.92       High
cufflinks 0.752        
cufflinks 0.413       Low
cufflinks 0.791        
cufflinks 0.829       High
cufflinks 0.461        
cufflinks 0.752        
cufflinks 0.44        

0 Strain