Gene : Glyma.01G200900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13428 - INNER NUCLEAR MEMBRANE PROTEIN MAN1 LEM DOMAIN CONTAINING PROTEIN Genomic Order:  2009
Name:  ? Glyma.01G200900 Secondary Identifier:  ? PAC:30544888
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G200900 0.5kb upstream 0.5kb upstream 4892 true Chr01: 53456587-53461478 Glycine max
Glyma.01G200900 0.5kb upstream 0.5kb upstream 500 false Chr01: 53460979-53461478 Glycine max
Glyma.01G200900 0.5kb downstream 0.5kb downstream 4892 true Chr01: 53456087-53460978 Glycine max
Glyma.01G200900 0.5kb downstream 0.5kb downstream 500 false Chr01: 53456087-53456586 Glycine max
Glyma.01G200900 1.0kb upstream 1.0kb upstream 5392 true Chr01: 53456587-53461978 Glycine max
Glyma.01G200900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 53460979-53461978 Glycine max
Glyma.01G200900 1.0kb downstream 1.0kb downstream 5392 true Chr01: 53455587-53460978 Glycine max
Glyma.01G200900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 53455587-53456586 Glycine max
Glyma.01G200900 2.0kb upstream 2.0kb upstream 6392 true Chr01: 53456587-53462978 Glycine max
Glyma.01G200900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 53460979-53462978 Glycine max
Glyma.01G200900 2.0kb downstream 2.0kb downstream 6392 true Chr01: 53454587-53460978 Glycine max
Glyma.01G200900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 53454587-53456586 Glycine max
Glyma.01G200900 5.0kb upstream 5.0kb upstream 9392 true Chr01: 53456587-53465978 Glycine max
Glyma.01G200900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 53460979-53465978 Glycine max
Glyma.01G200900 5.0kb downstream 5.0kb downstream 9392 true Chr01: 53451587-53460978 Glycine max
Glyma.01G200900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 53451587-53456586 Glycine max
Glyma.01G200900 10.0kb upstream 10.0kb upstream 14392 true Chr01: 53456587-53470978 Glycine max
Glyma.01G200900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 53460979-53470978 Glycine max
Glyma.01G200900 10.0kb downstream 10.0kb downstream 14392 true Chr01: 53446587-53460978 Glycine max
Glyma.01G200900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 53446587-53456586 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303508 5265 Fabidae View MSA
124062152 5270 Rosid View MSA
123738040 5271 Pentapetalae View MSA
122785775 5272 Eudicot View MSA
122043959 5273 Angiosperm View MSA
121347546 5274 Embryophyte View MSA
123380568 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.94828 0.0 9.34766    
cufflinks 4.00567 0.0 15.8114    
cufflinks 3.40369 0.0 10.3159    
cufflinks 4.03285 0.0 15.7242    
cufflinks 2.44068 0.0 8.27895   Low
cufflinks 4.1092 0.0 18.6454    
cufflinks 3.9568 0.0 15.5333    
cufflinks 3.26688 0.0 14.2723    
cufflinks 4.29781 0.0 15.8801   High
cufflinks 0.376        
cufflinks 0.21       Low
cufflinks 0.608       High
cufflinks 0.494        
cufflinks 0.36        
cufflinks 0.328        
cufflinks 0.37        
cufflinks 0.182       Low
cufflinks 0.71       High
cufflinks 0.734       High
cufflinks 0.437        
cufflinks 0.215       Low
cufflinks 0.479        
cufflinks 0.444        
cufflinks 0.4        
cufflinks 0.375        
cufflinks 0.218       Low

0 Strain