Gene : Glyma.18G077800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR35708:SF1 - GB Genomic Order:  778
Name:  ? Glyma.18G077800 Secondary Identifier:  ? PAC:30556103
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G077800 0.5kb upstream 0.5kb upstream 2144 true Chr18: 7411806-7413949 Glycine max
Glyma.18G077800 0.5kb upstream 0.5kb upstream 500 false Chr18: 7413450-7413949 Glycine max
Glyma.18G077800 0.5kb downstream 0.5kb downstream 2144 true Chr18: 7411306-7413449 Glycine max
Glyma.18G077800 0.5kb downstream 0.5kb downstream 500 false Chr18: 7411306-7411805 Glycine max
Glyma.18G077800 1.0kb upstream 1.0kb upstream 2644 true Chr18: 7411806-7414449 Glycine max
Glyma.18G077800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 7413450-7414449 Glycine max
Glyma.18G077800 1.0kb downstream 1.0kb downstream 2644 true Chr18: 7410806-7413449 Glycine max
Glyma.18G077800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 7410806-7411805 Glycine max
Glyma.18G077800 2.0kb upstream 2.0kb upstream 3644 true Chr18: 7411806-7415449 Glycine max
Glyma.18G077800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 7413450-7415449 Glycine max
Glyma.18G077800 2.0kb downstream 2.0kb downstream 3644 true Chr18: 7409806-7413449 Glycine max
Glyma.18G077800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 7409806-7411805 Glycine max
Glyma.18G077800 5.0kb upstream 5.0kb upstream 6644 true Chr18: 7411806-7418449 Glycine max
Glyma.18G077800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 7413450-7418449 Glycine max
Glyma.18G077800 5.0kb downstream 5.0kb downstream 6644 true Chr18: 7406806-7413449 Glycine max
Glyma.18G077800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 7406806-7411805 Glycine max
Glyma.18G077800 10.0kb upstream 10.0kb upstream 11644 true Chr18: 7411806-7423449 Glycine max
Glyma.18G077800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 7413450-7423449 Glycine max
Glyma.18G077800 10.0kb downstream 10.0kb downstream 11644 true Chr18: 7401806-7413449 Glycine max
Glyma.18G077800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 7401806-7411805 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298594 5265 Fabidae View MSA
124070540 5270 Rosid View MSA
123748172 5271 Pentapetalae View MSA
122794330 5272 Eudicot View MSA
122044423 5273 Angiosperm View MSA
121310293 5274 Embryophyte View MSA
123347819 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.34602 0.0 12.4046    
cufflinks 0.227377 0.0 1.12706   Low
cufflinks 0.0746514 0.0 0.301599 Low Low
cufflinks 5.61064 0.0 23.7751   High
cufflinks 2.61846 0.0 14.3063    
cufflinks 1.00592 0.0 6.3061    
cufflinks 0.716619 0.0 6.87145    
cufflinks 1.21997 0.0 5.38602    
cufflinks 0.397        
cufflinks 0.006     Low Low
cufflinks 0.399        
cufflinks 1.013       High
cufflinks 1.652       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.364        
cufflinks 0.031     Low Low
cufflinks 0.215        
cufflinks 0.907        
cufflinks 0.344        
cufflinks 0.014     Low Low
cufflinks 0.39        
cufflinks 0.174        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.263        
cufflinks 0.058     Low  

0 Strain