Gene : Glyma.17G249600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR35464:SF1 - F18O14.9 Genomic Order:  2496
Name:  ? Glyma.17G249600 Secondary Identifier:  ? PAC:30482191
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G249600 0.5kb upstream 0.5kb upstream 2991   true Chr17: 40466627-40469617 Glycine max
Glyma.17G249600 0.5kb upstream 0.5kb upstream 500   false Chr17: 40469118-40469617 Glycine max
Glyma.17G249600 0.5kb downstream 0.5kb downstream 2991   true Chr17: 40466127-40469117 Glycine max
Glyma.17G249600 0.5kb downstream 0.5kb downstream 500   false Chr17: 40466127-40466626 Glycine max
Glyma.17G249600 1.0kb upstream 1.0kb upstream 3491   true Chr17: 40466627-40470117 Glycine max
Glyma.17G249600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 40469118-40470117 Glycine max
Glyma.17G249600 1.0kb downstream 1.0kb downstream 3491   true Chr17: 40465627-40469117 Glycine max
Glyma.17G249600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 40465627-40466626 Glycine max
Glyma.17G249600 2.0kb upstream 2.0kb upstream 4491   true Chr17: 40466627-40471117 Glycine max
Glyma.17G249600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 40469118-40471117 Glycine max
Glyma.17G249600 2.0kb downstream 2.0kb downstream 4491   true Chr17: 40464627-40469117 Glycine max
Glyma.17G249600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 40464627-40466626 Glycine max
Glyma.17G249600 5.0kb upstream 5.0kb upstream 7491   true Chr17: 40466627-40474117 Glycine max
Glyma.17G249600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 40469118-40474117 Glycine max
Glyma.17G249600 5.0kb downstream 5.0kb downstream 7491   true Chr17: 40461627-40469117 Glycine max
Glyma.17G249600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 40461627-40466626 Glycine max
Glyma.17G249600 10.0kb upstream 10.0kb upstream 12491   true Chr17: 40466627-40479117 Glycine max
Glyma.17G249600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 40469118-40479117 Glycine max
Glyma.17G249600 10.0kb downstream 10.0kb downstream 12491   true Chr17: 40456627-40469117 Glycine max
Glyma.17G249600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 40456627-40466626 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303648 5265 Fabidae View MSA
124062164 5270 Rosid View MSA
123740083 5271 Pentapetalae View MSA
122790086 5272 Eudicot View MSA
122043322 5273 Angiosperm View MSA
121347201 5274 Embryophyte View MSA
123427704 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.16893 0.0 19.4065    
cufflinks 8.1909 0.0 22.0317    
cufflinks 4.68991 0.0 13.0571   Low
cufflinks 11.9642 0.0 31.9198    
cufflinks 8.93044 0.0 23.9549    
cufflinks 7.82771 0.0 21.0895    
cufflinks 16.6284 0.0 44.5569   High
cufflinks 9.69572 0.0 25.9347    
cufflinks 7.15451 0.0 19.3621    
cufflinks 9.913     High  
cufflinks 0.88       Low
cufflinks 9.59     High  
cufflinks 9.577     High  
cufflinks 13.551     High  
cufflinks 1.253       Low
cufflinks 9.123     High  
cufflinks 2.309        
cufflinks 12.006     High  
cufflinks 13.86     High  
cufflinks 9.15     High  
cufflinks 1.122       Low
cufflinks 10.175     High  
cufflinks 9.246     High  
cufflinks 2.577        
cufflinks 8.206     High  
cufflinks 1.166       Low

0 Strain