Gene : Glyma.17G260800 G. max Wm82.a2.v1
Genomic Order:  2608 Name:  ? Glyma.17G260800
Secondary Identifier:  ? PAC:30480325
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G260800 0.5kb upstream 0.5kb upstream 1411   true Chr17: 41470821-41472231 Glycine max
Glyma.17G260800 0.5kb upstream 0.5kb upstream 500   false Chr17: 41470821-41471320 Glycine max
Glyma.17G260800 0.5kb downstream 0.5kb downstream 1411   true Chr17: 41471321-41472731 Glycine max
Glyma.17G260800 0.5kb downstream 0.5kb downstream 500   false Chr17: 41472232-41472731 Glycine max
Glyma.17G260800 1.0kb upstream 1.0kb upstream 1911   true Chr17: 41470321-41472231 Glycine max
Glyma.17G260800 1.0kb upstream 1.0kb upstream 1000   false Chr17: 41470321-41471320 Glycine max
Glyma.17G260800 1.0kb downstream 1.0kb downstream 1911   true Chr17: 41471321-41473231 Glycine max
Glyma.17G260800 1.0kb downstream 1.0kb downstream 1000   false Chr17: 41472232-41473231 Glycine max
Glyma.17G260800 2.0kb upstream 2.0kb upstream 2911   true Chr17: 41469321-41472231 Glycine max
Glyma.17G260800 2.0kb upstream 2.0kb upstream 2000   false Chr17: 41469321-41471320 Glycine max
Glyma.17G260800 2.0kb downstream 2.0kb downstream 2911   true Chr17: 41471321-41474231 Glycine max
Glyma.17G260800 2.0kb downstream 2.0kb downstream 2000   false Chr17: 41472232-41474231 Glycine max
Glyma.17G260800 5.0kb upstream 5.0kb upstream 5911   true Chr17: 41466321-41472231 Glycine max
Glyma.17G260800 5.0kb upstream 5.0kb upstream 5000   false Chr17: 41466321-41471320 Glycine max
Glyma.17G260800 5.0kb downstream 5.0kb downstream 5911   true Chr17: 41471321-41477231 Glycine max
Glyma.17G260800 5.0kb downstream 5.0kb downstream 5000   false Chr17: 41472232-41477231 Glycine max
Glyma.17G260800 10.0kb upstream 10.0kb upstream 10911   true Chr17: 41461321-41472231 Glycine max
Glyma.17G260800 10.0kb upstream 10.0kb upstream 10000   false Chr17: 41461321-41471320 Glycine max
Glyma.17G260800 10.0kb downstream 10.0kb downstream 10911   true Chr17: 41471321-41482231 Glycine max
Glyma.17G260800 10.0kb downstream 10.0kb downstream 10000   false Chr17: 41472232-41482231 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121611217 5273 Angiosperm Singleton cluster - no MSA
122244249 5265 Fabidae Singleton cluster - no MSA
123988600 5270 Rosid Singleton cluster - no MSA
123563769 5271 Pentapetalae Singleton cluster - no MSA
122598544 5272 Eudicot Singleton cluster - no MSA
120883450 5274 Embryophyte Singleton cluster - no MSA
122924271 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.286158 0.0 1.18055    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0927852 0.0 0.419667 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.98        
cufflinks 0.155        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.265        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.634       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.208        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.485        

0 Strain