Gene : Glyma.17G228600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11040//PTHR11040:SF52 - ZINC/IRON TRANSPORTER Genomic Order:  2286
Name:  ? Glyma.17G228600 Secondary Identifier:  ? PAC:30480584
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G228600 0.5kb upstream 0.5kb upstream 4100   true Chr17: 38349187-38353286 Glycine max
Glyma.17G228600 0.5kb upstream 0.5kb upstream 500   false Chr17: 38349187-38349686 Glycine max
Glyma.17G228600 0.5kb downstream 0.5kb downstream 4100   true Chr17: 38349687-38353786 Glycine max
Glyma.17G228600 0.5kb downstream 0.5kb downstream 500   false Chr17: 38353287-38353786 Glycine max
Glyma.17G228600 1.0kb upstream 1.0kb upstream 4600   true Chr17: 38348687-38353286 Glycine max
Glyma.17G228600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 38348687-38349686 Glycine max
Glyma.17G228600 1.0kb downstream 1.0kb downstream 4600   true Chr17: 38349687-38354286 Glycine max
Glyma.17G228600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 38353287-38354286 Glycine max
Glyma.17G228600 2.0kb upstream 2.0kb upstream 5600   true Chr17: 38347687-38353286 Glycine max
Glyma.17G228600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 38347687-38349686 Glycine max
Glyma.17G228600 2.0kb downstream 2.0kb downstream 5600   true Chr17: 38349687-38355286 Glycine max
Glyma.17G228600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 38353287-38355286 Glycine max
Glyma.17G228600 5.0kb upstream 5.0kb upstream 8600   true Chr17: 38344687-38353286 Glycine max
Glyma.17G228600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 38344687-38349686 Glycine max
Glyma.17G228600 5.0kb downstream 5.0kb downstream 8600   true Chr17: 38349687-38358286 Glycine max
Glyma.17G228600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 38353287-38358286 Glycine max
Glyma.17G228600 10.0kb upstream 10.0kb upstream 13600   true Chr17: 38339687-38353286 Glycine max
Glyma.17G228600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 38339687-38349686 Glycine max
Glyma.17G228600 10.0kb downstream 10.0kb downstream 13600   true Chr17: 38349687-38363286 Glycine max
Glyma.17G228600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 38353287-38363286 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255195 5265 Fabidae View MSA
123997019 5270 Rosid View MSA
123743015 5271 Pentapetalae View MSA
122796517 5272 Eudicot View MSA
122042436 5273 Angiosperm View MSA
121350029 5274 Embryophyte View MSA
123428132 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.41716 0.0 28.4298    
cufflinks 2.00637 0.0 10.5336   Low
cufflinks 8.29834 0.0 30.3201    
cufflinks 2.0692 0.0 11.2134   Low
cufflinks 8.14121 0.0 28.3768    
cufflinks 21.0554 0.0 74.1856   High
cufflinks 3.17495 0.0 14.3391    
cufflinks 2.96359 0.0 14.5119    
cufflinks 8.65586 0.0 29.6395    
cufflinks 0.316       Low
cufflinks 2.309       High
cufflinks 0.749        
cufflinks 0.68        
cufflinks 0.518        
cufflinks 0.926        
cufflinks 0.617        
cufflinks 0.562        
cufflinks 0.666        
cufflinks 0.393        
cufflinks 0.571        
cufflinks 4.853       High
cufflinks 0.741        
cufflinks 0.422        
cufflinks 2.39       High
cufflinks 0.576        
cufflinks 4.096       High

0 Strain