Gene : Glyma.17G160500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR21717:SF27 - TELOMERE REPEAT-BINDING FACTOR 2-RELATED Genomic Order:  1605
Name:  ? Glyma.17G160500 Secondary Identifier:  ? PAC:30478959
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G160500 0.5kb upstream 0.5kb upstream 10121   true Chr17: 13938149-13948269 Glycine max
Glyma.17G160500 0.5kb upstream 0.5kb upstream 500   false Chr17: 13938149-13938648 Glycine max
Glyma.17G160500 0.5kb downstream 0.5kb downstream 10121   true Chr17: 13938649-13948769 Glycine max
Glyma.17G160500 0.5kb downstream 0.5kb downstream 500   false Chr17: 13948270-13948769 Glycine max
Glyma.17G160500 1.0kb upstream 1.0kb upstream 10621   true Chr17: 13937649-13948269 Glycine max
Glyma.17G160500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 13937649-13938648 Glycine max
Glyma.17G160500 1.0kb downstream 1.0kb downstream 10621   true Chr17: 13938649-13949269 Glycine max
Glyma.17G160500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 13948270-13949269 Glycine max
Glyma.17G160500 2.0kb upstream 2.0kb upstream 11621   true Chr17: 13936649-13948269 Glycine max
Glyma.17G160500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 13936649-13938648 Glycine max
Glyma.17G160500 2.0kb downstream 2.0kb downstream 11621   true Chr17: 13938649-13950269 Glycine max
Glyma.17G160500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 13948270-13950269 Glycine max
Glyma.17G160500 5.0kb upstream 5.0kb upstream 14621   true Chr17: 13933649-13948269 Glycine max
Glyma.17G160500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 13933649-13938648 Glycine max
Glyma.17G160500 5.0kb downstream 5.0kb downstream 14621   true Chr17: 13938649-13953269 Glycine max
Glyma.17G160500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 13948270-13953269 Glycine max
Glyma.17G160500 10.0kb upstream 10.0kb upstream 19621   true Chr17: 13928649-13948269 Glycine max
Glyma.17G160500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 13928649-13938648 Glycine max
Glyma.17G160500 10.0kb downstream 10.0kb downstream 19621   true Chr17: 13938649-13958269 Glycine max
Glyma.17G160500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 13948270-13958269 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309992 5265 Fabidae View MSA
124073708 5270 Rosid View MSA
123739242 5271 Pentapetalae View MSA
122787405 5272 Eudicot View MSA
122045775 5273 Angiosperm View MSA
121350383 5274 Embryophyte View MSA
123425799 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.50248 0.0 13.1835    
cufflinks 3.97627 0.0 17.589    
cufflinks 2.14757 0.0 10.2115   Low
cufflinks 3.42215 0.0 15.6809    
cufflinks 3.15001 0.0 15.0637    
cufflinks 2.93604 0.0 12.4704    
cufflinks 6.53579 0.0 24.4918   High
cufflinks 2.96896 0.0 12.2965    
cufflinks 4.97255 0.0 20.1595   High
cufflinks 0.16        
cufflinks 0.076       Low
cufflinks 0.188        
cufflinks 0.183        
cufflinks 0.166        
cufflinks 0.205        
cufflinks 0.164        
cufflinks 0.073       Low
cufflinks 0.229        
cufflinks 0.287       High
cufflinks 0.178        
cufflinks 0.101       Low
cufflinks 0.197        
cufflinks 0.207        
cufflinks 0.115        
cufflinks 0.195        
cufflinks 0.076       Low

0 Strain