Gene : Glyma.17G138900 G. max Wm82.a2.v1
Genomic Order:  1389 Name:  ? Glyma.17G138900
Secondary Identifier:  ? PAC:30482522
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G138900 0.5kb upstream 0.5kb upstream 815   true Chr17: 11274512-11275326 Glycine max
Glyma.17G138900 0.5kb upstream 0.5kb upstream 500   false Chr17: 11274512-11275011 Glycine max
Glyma.17G138900 0.5kb downstream 0.5kb downstream 815   true Chr17: 11275012-11275826 Glycine max
Glyma.17G138900 0.5kb downstream 0.5kb downstream 500   false Chr17: 11275327-11275826 Glycine max
Glyma.17G138900 1.0kb upstream 1.0kb upstream 1315   true Chr17: 11274012-11275326 Glycine max
Glyma.17G138900 1.0kb upstream 1.0kb upstream 1000   false Chr17: 11274012-11275011 Glycine max
Glyma.17G138900 1.0kb downstream 1.0kb downstream 1315   true Chr17: 11275012-11276326 Glycine max
Glyma.17G138900 1.0kb downstream 1.0kb downstream 1000   false Chr17: 11275327-11276326 Glycine max
Glyma.17G138900 2.0kb upstream 2.0kb upstream 2315   true Chr17: 11273012-11275326 Glycine max
Glyma.17G138900 2.0kb upstream 2.0kb upstream 2000   false Chr17: 11273012-11275011 Glycine max
Glyma.17G138900 2.0kb downstream 2.0kb downstream 2315   true Chr17: 11275012-11277326 Glycine max
Glyma.17G138900 2.0kb downstream 2.0kb downstream 2000   false Chr17: 11275327-11277326 Glycine max
Glyma.17G138900 5.0kb upstream 5.0kb upstream 5315   true Chr17: 11270012-11275326 Glycine max
Glyma.17G138900 5.0kb upstream 5.0kb upstream 5000   false Chr17: 11270012-11275011 Glycine max
Glyma.17G138900 5.0kb downstream 5.0kb downstream 5315   true Chr17: 11275012-11280326 Glycine max
Glyma.17G138900 5.0kb downstream 5.0kb downstream 5000   false Chr17: 11275327-11280326 Glycine max
Glyma.17G138900 10.0kb upstream 10.0kb upstream 10315   true Chr17: 11265012-11275326 Glycine max
Glyma.17G138900 10.0kb upstream 10.0kb upstream 10000   false Chr17: 11265012-11275011 Glycine max
Glyma.17G138900 10.0kb downstream 10.0kb downstream 10315   true Chr17: 11275012-11285326 Glycine max
Glyma.17G138900 10.0kb downstream 10.0kb downstream 10000   false Chr17: 11275327-11285326 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121610618 5273 Angiosperm Singleton cluster - no MSA
122243372 5265 Fabidae Singleton cluster - no MSA
123987898 5270 Rosid Singleton cluster - no MSA
123563127 5271 Pentapetalae Singleton cluster - no MSA
122597907 5272 Eudicot Singleton cluster - no MSA
120882857 5274 Embryophyte Singleton cluster - no MSA
122923691 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 54.4551 0.0 162.943 High High
cufflinks 5.28503 0.0 19.7914    
cufflinks 3.35851 0.0 12.801    
cufflinks 4.93784 0.0 18.4928    
cufflinks 0.946192 0.0 3.78944    
cufflinks 0.31209 0.0 1.33747   Low
cufflinks 0.69995 0.0 2.83929    
cufflinks 12.2834 0.0 43.6483    
cufflinks 2.57918 0.0 9.94745    
cufflinks 4.404       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.817        
cufflinks 0.197       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.883        
cufflinks 0.519       Low
cufflinks 4.354       High
cufflinks 1.452        
cufflinks 1.451        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.673        
cufflinks 2.041        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.306        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain