Gene : Glyma.17G138500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31953:SF17 - ACID BETA-FRUCTOFURANOSIDASE 3, VACUOLAR-RELATED Genomic Order:  1385
Name:  ? Glyma.17G138500 Secondary Identifier:  ? PAC:30480861
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-621 Glycine max pathologic  
Gmax PWY66-373 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G138500 0.5kb upstream 0.5kb upstream 5182   true Chr17: 11222613-11227794 Glycine max
Glyma.17G138500 0.5kb upstream 0.5kb upstream 500   false Chr17: 11227295-11227794 Glycine max
Glyma.17G138500 0.5kb downstream 0.5kb downstream 5182   true Chr17: 11222113-11227294 Glycine max
Glyma.17G138500 0.5kb downstream 0.5kb downstream 500   false Chr17: 11222113-11222612 Glycine max
Glyma.17G138500 1.0kb upstream 1.0kb upstream 5682   true Chr17: 11222613-11228294 Glycine max
Glyma.17G138500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 11227295-11228294 Glycine max
Glyma.17G138500 1.0kb downstream 1.0kb downstream 5682   true Chr17: 11221613-11227294 Glycine max
Glyma.17G138500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 11221613-11222612 Glycine max
Glyma.17G138500 2.0kb upstream 2.0kb upstream 6682   true Chr17: 11222613-11229294 Glycine max
Glyma.17G138500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 11227295-11229294 Glycine max
Glyma.17G138500 2.0kb downstream 2.0kb downstream 6682   true Chr17: 11220613-11227294 Glycine max
Glyma.17G138500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 11220613-11222612 Glycine max
Glyma.17G138500 5.0kb upstream 5.0kb upstream 9682   true Chr17: 11222613-11232294 Glycine max
Glyma.17G138500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 11227295-11232294 Glycine max
Glyma.17G138500 5.0kb downstream 5.0kb downstream 9682   true Chr17: 11217613-11227294 Glycine max
Glyma.17G138500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 11217613-11222612 Glycine max
Glyma.17G138500 10.0kb upstream 10.0kb upstream 14682   true Chr17: 11222613-11237294 Glycine max
Glyma.17G138500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 11227295-11237294 Glycine max
Glyma.17G138500 10.0kb downstream 10.0kb downstream 14682   true Chr17: 11212613-11227294 Glycine max
Glyma.17G138500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 11212613-11222612 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311910 5265 Fabidae View MSA
124068075 5270 Rosid View MSA
123746739 5271 Pentapetalae View MSA
122793331 5272 Eudicot View MSA
122044228 5273 Angiosperm View MSA
121350675 5274 Embryophyte View MSA
123428659 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 61.8207 0.0 275.273 High  
cufflinks 27.6772 0.0 111.578 High  
cufflinks 13.5162 0.0 52.2304    
cufflinks 39.3343 0.0 171.432 High  
cufflinks 80.9684 0.0 406.029 High High
cufflinks 55.8759 0.0 240.04 High  
cufflinks 2.17294 0.0 6.83313   Low
cufflinks 5.04196 0.0 20.7936   Low
cufflinks 14.9389 0.0 55.7077    
cufflinks 53.516     High High
cufflinks 1.647       Low
cufflinks 18.145     High  
cufflinks 42.669     High High
cufflinks 25.399     High  
cufflinks 1.885       Low
cufflinks 10.886     High  
cufflinks 9.498     High  
cufflinks 30.925     High  
cufflinks 47.518     High High
cufflinks 4.648        
cufflinks 3.828        
cufflinks 6.345        
cufflinks 48.859     High High
cufflinks 4.444        
cufflinks 9.224     High  
cufflinks 5.222        

0 Strain