Gene : Glyma.17G104000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11630:SF42 - DNA REPLICATION LICENSING FACTOR MCM5 Genomic Order:  1040
Name:  ? Glyma.17G104000 Secondary Identifier:  ? PAC:30481400
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G104000 0.5kb upstream 0.5kb upstream 6186   true Chr17: 8153582-8159767 Glycine max
Glyma.17G104000 0.5kb upstream 0.5kb upstream 500   false Chr17: 8159268-8159767 Glycine max
Glyma.17G104000 0.5kb downstream 0.5kb downstream 6186   true Chr17: 8153082-8159267 Glycine max
Glyma.17G104000 0.5kb downstream 0.5kb downstream 500   false Chr17: 8153082-8153581 Glycine max
Glyma.17G104000 1.0kb upstream 1.0kb upstream 6686   true Chr17: 8153582-8160267 Glycine max
Glyma.17G104000 1.0kb upstream 1.0kb upstream 1000   false Chr17: 8159268-8160267 Glycine max
Glyma.17G104000 1.0kb downstream 1.0kb downstream 6686   true Chr17: 8152582-8159267 Glycine max
Glyma.17G104000 1.0kb downstream 1.0kb downstream 1000   false Chr17: 8152582-8153581 Glycine max
Glyma.17G104000 2.0kb upstream 2.0kb upstream 7686   true Chr17: 8153582-8161267 Glycine max
Glyma.17G104000 2.0kb upstream 2.0kb upstream 2000   false Chr17: 8159268-8161267 Glycine max
Glyma.17G104000 2.0kb downstream 2.0kb downstream 7686   true Chr17: 8151582-8159267 Glycine max
Glyma.17G104000 2.0kb downstream 2.0kb downstream 2000   false Chr17: 8151582-8153581 Glycine max
Glyma.17G104000 5.0kb upstream 5.0kb upstream 10686   true Chr17: 8153582-8164267 Glycine max
Glyma.17G104000 5.0kb upstream 5.0kb upstream 5000   false Chr17: 8159268-8164267 Glycine max
Glyma.17G104000 5.0kb downstream 5.0kb downstream 10686   true Chr17: 8148582-8159267 Glycine max
Glyma.17G104000 5.0kb downstream 5.0kb downstream 5000   false Chr17: 8148582-8153581 Glycine max
Glyma.17G104000 10.0kb upstream 10.0kb upstream 15686   true Chr17: 8153582-8169267 Glycine max
Glyma.17G104000 10.0kb upstream 10.0kb upstream 10000   false Chr17: 8159268-8169267 Glycine max
Glyma.17G104000 10.0kb downstream 10.0kb downstream 15686   true Chr17: 8143582-8159267 Glycine max
Glyma.17G104000 10.0kb downstream 10.0kb downstream 10000   false Chr17: 8143582-8153581 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304817 5265 Fabidae View MSA
124068340 5270 Rosid View MSA
123739009 5271 Pentapetalae View MSA
122789464 5272 Eudicot View MSA
122046085 5273 Angiosperm View MSA
123428876 5275 Viridiplantae View MSA
121346646 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.27261 0.0 1.31544   Low
cufflinks 9.72732 0.0 33.6682   High
cufflinks 0.755978 0.0 4.05476   Low
cufflinks 2.35866 0.0 9.10294    
cufflinks 5.14778 0.0 18.8979    
cufflinks 2.62528 0.0 9.60472    
cufflinks 2.72732 0.0 9.96395    
cufflinks 3.03643 0.0 10.6205    
cufflinks 4.38884 0.0 14.199    
cufflinks 1.003        
cufflinks 0.061       Low
cufflinks 0.883        
cufflinks 2.209        
cufflinks 2.679       High
cufflinks 0.069       Low
cufflinks 1.191        
cufflinks 0.263        
cufflinks 0.662        
cufflinks 3.913       High
cufflinks 0.802        
cufflinks 0.172        
cufflinks 1.096        
cufflinks 3.374       High
cufflinks 0.081       Low
cufflinks 1.028        
cufflinks 0.314        

0 Strain