Gene : Glyma.17G044900 G. max Wm82.a2.v1
Defline:  (1 of 164) 3.1.1.11 - Pectinesterase / Pectin methylesterase Genomic Order:  449
Name:  ? Glyma.17G044900 Secondary Identifier:  ? PAC:30481972
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1081 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G044900 0.5kb upstream 0.5kb upstream 1507   true Chr17: 3327543-3329049 Glycine max
Glyma.17G044900 0.5kb upstream 0.5kb upstream 500   false Chr17: 3327543-3328042 Glycine max
Glyma.17G044900 0.5kb downstream 0.5kb downstream 1507   true Chr17: 3328043-3329549 Glycine max
Glyma.17G044900 0.5kb downstream 0.5kb downstream 500   false Chr17: 3329050-3329549 Glycine max
Glyma.17G044900 1.0kb upstream 1.0kb upstream 2007   true Chr17: 3327043-3329049 Glycine max
Glyma.17G044900 1.0kb upstream 1.0kb upstream 1000   false Chr17: 3327043-3328042 Glycine max
Glyma.17G044900 1.0kb downstream 1.0kb downstream 2007   true Chr17: 3328043-3330049 Glycine max
Glyma.17G044900 1.0kb downstream 1.0kb downstream 1000   false Chr17: 3329050-3330049 Glycine max
Glyma.17G044900 2.0kb upstream 2.0kb upstream 3007   true Chr17: 3326043-3329049 Glycine max
Glyma.17G044900 2.0kb upstream 2.0kb upstream 2000   false Chr17: 3326043-3328042 Glycine max
Glyma.17G044900 2.0kb downstream 2.0kb downstream 3007   true Chr17: 3328043-3331049 Glycine max
Glyma.17G044900 2.0kb downstream 2.0kb downstream 2000   false Chr17: 3329050-3331049 Glycine max
Glyma.17G044900 5.0kb upstream 5.0kb upstream 6007   true Chr17: 3323043-3329049 Glycine max
Glyma.17G044900 5.0kb upstream 5.0kb upstream 5000   false Chr17: 3323043-3328042 Glycine max
Glyma.17G044900 5.0kb downstream 5.0kb downstream 6007   true Chr17: 3328043-3334049 Glycine max
Glyma.17G044900 5.0kb downstream 5.0kb downstream 5000   false Chr17: 3329050-3334049 Glycine max
Glyma.17G044900 10.0kb upstream 10.0kb upstream 11007   true Chr17: 3318043-3329049 Glycine max
Glyma.17G044900 10.0kb upstream 10.0kb upstream 10000   false Chr17: 3318043-3328042 Glycine max
Glyma.17G044900 10.0kb downstream 10.0kb downstream 11007   true Chr17: 3328043-3339049 Glycine max
Glyma.17G044900 10.0kb downstream 10.0kb downstream 10000   false Chr17: 3329050-3339049 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250146 5265 Fabidae View MSA
124071988 5270 Rosid View MSA
123753190 5271 Pentapetalae View MSA
122797507 5272 Eudicot View MSA
122048536 5273 Angiosperm View MSA
121311011 5274 Embryophyte View MSA
123348369 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0248402 0.0 0.11234 Low  
cufflinks 0.119402 0.0 0.482114 Low  
cufflinks 0.0589336 0.0 0.246702 Low  
cufflinks 0.0659993 0.0 0.274916 Low  
cufflinks 3.67694 0.0 12.2369   High
cufflinks 3.37462 0.0 11.3543   High
cufflinks 0.0648578 0.0 0.27082 Low  
cufflinks 0.0236451 0.0 0.107017 Low Low
cufflinks 1.96754 0.0 6.96087   High
cufflinks 0.657        
cufflinks 1.541        
cufflinks 0.061     Low  
cufflinks 8.082     High High
cufflinks 5.646       High
cufflinks 0.148        
cufflinks 0.019     Low Low
cufflinks 0.889        
cufflinks 0.065     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low Low
cufflinks 1.416        
cufflinks 0.038     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.389        
cufflinks 0.041     Low  
cufflinks 1.795        

0 Strain