Gene : Glyma.17G043500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12668:SF5 - UPF0136 MEMBRANE PROTEIN YJR085C Genomic Order:  435
Name:  ? Glyma.17G043500 Secondary Identifier:  ? PAC:30482443
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G043500 0.5kb upstream 0.5kb upstream 3074   true Chr17: 3232678-3235751 Glycine max
Glyma.17G043500 0.5kb upstream 0.5kb upstream 500   false Chr17: 3232678-3233177 Glycine max
Glyma.17G043500 0.5kb downstream 0.5kb downstream 3074   true Chr17: 3233178-3236251 Glycine max
Glyma.17G043500 0.5kb downstream 0.5kb downstream 500   false Chr17: 3235752-3236251 Glycine max
Glyma.17G043500 1.0kb upstream 1.0kb upstream 3574   true Chr17: 3232178-3235751 Glycine max
Glyma.17G043500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 3232178-3233177 Glycine max
Glyma.17G043500 1.0kb downstream 1.0kb downstream 3574   true Chr17: 3233178-3236751 Glycine max
Glyma.17G043500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 3235752-3236751 Glycine max
Glyma.17G043500 2.0kb upstream 2.0kb upstream 4574   true Chr17: 3231178-3235751 Glycine max
Glyma.17G043500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 3231178-3233177 Glycine max
Glyma.17G043500 2.0kb downstream 2.0kb downstream 4574   true Chr17: 3233178-3237751 Glycine max
Glyma.17G043500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 3235752-3237751 Glycine max
Glyma.17G043500 5.0kb upstream 5.0kb upstream 7574   true Chr17: 3228178-3235751 Glycine max
Glyma.17G043500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 3228178-3233177 Glycine max
Glyma.17G043500 5.0kb downstream 5.0kb downstream 7574   true Chr17: 3233178-3240751 Glycine max
Glyma.17G043500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 3235752-3240751 Glycine max
Glyma.17G043500 10.0kb upstream 10.0kb upstream 12574   true Chr17: 3223178-3235751 Glycine max
Glyma.17G043500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 3223178-3233177 Glycine max
Glyma.17G043500 10.0kb downstream 10.0kb downstream 12574   true Chr17: 3233178-3245751 Glycine max
Glyma.17G043500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 3235752-3245751 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305664 5265 Fabidae View MSA
124067619 5270 Rosid View MSA
123736820 5271 Pentapetalae View MSA
122786957 5272 Eudicot View MSA
122047216 5273 Angiosperm View MSA
121351322 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.9966 0.0 95.3827 High  
cufflinks 59.7493 0.0 220.924 High  
cufflinks 21.5744 0.0 102.601 High Low
cufflinks 55.0197 0.0 274.03 High  
cufflinks 54.7217 0.0 260.605 High  
cufflinks 43.8701 0.0 158.221 High  
cufflinks 104.947 0.0 557.713 High High
cufflinks 54.9005 0.0 199.583 High  
cufflinks 52.7741 0.0 193.106 High  
cufflinks 7.618     High High
cufflinks 0.832       Low
cufflinks 4.901        
cufflinks 6.873        
cufflinks 10.038     High High
cufflinks 1.928        
cufflinks 4.286        
cufflinks 1.945        
cufflinks 5.872        
cufflinks 7.446     High High
cufflinks 4.366        
cufflinks 1.608       Low
cufflinks 4.637        
cufflinks 4.838        
cufflinks 1.059       Low
cufflinks 4.596        
cufflinks 2.179        

0 Strain