Gene : Glyma.17G050800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR33469:SF3 - PROTEIN ELF4-LIKE 2-RELATED Genomic Order:  508
Name:  ? Glyma.17G050800 Secondary Identifier:  ? PAC:30481625
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G050800 0.5kb upstream 0.5kb upstream 2481   true Chr17: 3859027-3861507 Glycine max
Glyma.17G050800 0.5kb upstream 0.5kb upstream 500   false Chr17: 3859027-3859526 Glycine max
Glyma.17G050800 0.5kb downstream 0.5kb downstream 2481   true Chr17: 3859527-3862007 Glycine max
Glyma.17G050800 0.5kb downstream 0.5kb downstream 500   false Chr17: 3861508-3862007 Glycine max
Glyma.17G050800 1.0kb upstream 1.0kb upstream 2981   true Chr17: 3858527-3861507 Glycine max
Glyma.17G050800 1.0kb upstream 1.0kb upstream 1000   false Chr17: 3858527-3859526 Glycine max
Glyma.17G050800 1.0kb downstream 1.0kb downstream 2981   true Chr17: 3859527-3862507 Glycine max
Glyma.17G050800 1.0kb downstream 1.0kb downstream 1000   false Chr17: 3861508-3862507 Glycine max
Glyma.17G050800 2.0kb upstream 2.0kb upstream 3981   true Chr17: 3857527-3861507 Glycine max
Glyma.17G050800 2.0kb upstream 2.0kb upstream 2000   false Chr17: 3857527-3859526 Glycine max
Glyma.17G050800 2.0kb downstream 2.0kb downstream 3981   true Chr17: 3859527-3863507 Glycine max
Glyma.17G050800 2.0kb downstream 2.0kb downstream 2000   false Chr17: 3861508-3863507 Glycine max
Glyma.17G050800 5.0kb upstream 5.0kb upstream 6981   true Chr17: 3854527-3861507 Glycine max
Glyma.17G050800 5.0kb upstream 5.0kb upstream 5000   false Chr17: 3854527-3859526 Glycine max
Glyma.17G050800 5.0kb downstream 5.0kb downstream 6981   true Chr17: 3859527-3866507 Glycine max
Glyma.17G050800 5.0kb downstream 5.0kb downstream 5000   false Chr17: 3861508-3866507 Glycine max
Glyma.17G050800 10.0kb upstream 10.0kb upstream 11981   true Chr17: 3849527-3861507 Glycine max
Glyma.17G050800 10.0kb upstream 10.0kb upstream 10000   false Chr17: 3849527-3859526 Glycine max
Glyma.17G050800 10.0kb downstream 10.0kb downstream 11981   true Chr17: 3859527-3871507 Glycine max
Glyma.17G050800 10.0kb downstream 10.0kb downstream 10000   false Chr17: 3861508-3871507 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299504 5265 Fabidae View MSA
124072685 5270 Rosid View MSA
123743503 5271 Pentapetalae View MSA
122791915 5272 Eudicot View MSA
122044075 5273 Angiosperm View MSA
121346271 5274 Embryophyte View MSA
123426517 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.003 0.0 85.7639    
cufflinks 21.1842 0.0 87.1994 High  
cufflinks 9.17957 0.0 31.0098   Low
cufflinks 19.0485 0.0 77.8966    
cufflinks 11.6593 0.0 54.4983    
cufflinks 47.437 0.0 153.737 High High
cufflinks 12.117 0.0 56.5701    
cufflinks 23.031 0.0 92.8654 High  
cufflinks 12.5889 0.0 58.7286    
cufflinks 3.773       High
cufflinks 0.753       Low
cufflinks 1.943        
cufflinks 2.677        
cufflinks 2.001        
cufflinks 1.011       Low
cufflinks 2.581        
cufflinks 0.811       Low
cufflinks 2.126        
cufflinks 2.888        
cufflinks 2.751        
cufflinks 0.862       Low
cufflinks 2.779        
cufflinks 2.072        
cufflinks 1.225        
cufflinks 3.011        
cufflinks 1.018       Low

0 Strain