Gene : Glyma.17G013400 G. max Wm82.a2.v1
Genomic Order:  134 Name:  ? Glyma.17G013400
Secondary Identifier:  ? PAC:30479960
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G013400 0.5kb upstream 0.5kb upstream 3798   true Chr17: 1021469-1025266 Glycine max
Glyma.17G013400 0.5kb upstream 0.5kb upstream 500   false Chr17: 1024767-1025266 Glycine max
Glyma.17G013400 0.5kb downstream 0.5kb downstream 3798   true Chr17: 1020969-1024766 Glycine max
Glyma.17G013400 0.5kb downstream 0.5kb downstream 500   false Chr17: 1020969-1021468 Glycine max
Glyma.17G013400 1.0kb upstream 1.0kb upstream 4298   true Chr17: 1021469-1025766 Glycine max
Glyma.17G013400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 1024767-1025766 Glycine max
Glyma.17G013400 1.0kb downstream 1.0kb downstream 4298   true Chr17: 1020469-1024766 Glycine max
Glyma.17G013400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 1020469-1021468 Glycine max
Glyma.17G013400 2.0kb upstream 2.0kb upstream 5298   true Chr17: 1021469-1026766 Glycine max
Glyma.17G013400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 1024767-1026766 Glycine max
Glyma.17G013400 2.0kb downstream 2.0kb downstream 5298   true Chr17: 1019469-1024766 Glycine max
Glyma.17G013400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 1019469-1021468 Glycine max
Glyma.17G013400 5.0kb upstream 5.0kb upstream 8298   true Chr17: 1021469-1029766 Glycine max
Glyma.17G013400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 1024767-1029766 Glycine max
Glyma.17G013400 5.0kb downstream 5.0kb downstream 8298   true Chr17: 1016469-1024766 Glycine max
Glyma.17G013400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 1016469-1021468 Glycine max
Glyma.17G013400 10.0kb upstream 10.0kb upstream 13298   true Chr17: 1021469-1034766 Glycine max
Glyma.17G013400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 1024767-1034766 Glycine max
Glyma.17G013400 10.0kb downstream 10.0kb downstream 13298   true Chr17: 1011469-1024766 Glycine max
Glyma.17G013400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 1011469-1021468 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306675 5265 Fabidae View MSA
124071206 5270 Rosid View MSA
123751109 5271 Pentapetalae View MSA
122797156 5272 Eudicot View MSA
122049701 5273 Angiosperm View MSA
121311549 5274 Embryophyte View MSA
123348831 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0642086 0.0 0.252339 Low Low
cufflinks 7.0286 0.0 18.8283    
cufflinks 0.739985 0.0 2.53097    
cufflinks 1.87872 0.0 5.67359    
cufflinks 4.15648 0.0 11.4699    
cufflinks 2.88118 0.0 8.24239    
cufflinks 2.73736 0.0 7.90181    
cufflinks 2.91899 0.0 8.32112    
cufflinks 3.8862 0.0 10.7796    
cufflinks 4.561        
cufflinks 0.336       Low
cufflinks 2.728        
cufflinks 8.102     High  
cufflinks 9.155     High  
cufflinks 0.103       Low
cufflinks 11.202     High  
cufflinks 1.296        
cufflinks 2.445        
cufflinks 11.083     High  
cufflinks 8.09     High  
cufflinks 0.589        
cufflinks 9.589     High  
cufflinks 11.33     High  
cufflinks 0.277       Low
cufflinks 7.764     High  
cufflinks 1.1        

0 Strain