Gene : Glyma.16G211900 G. max Wm82.a2.v1
Defline:  (1 of 330) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2119
Name:  ? Glyma.16G211900 Secondary Identifier:  ? PAC:30561654
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G211900 0.5kb upstream 0.5kb upstream 2407 true Chr16: 37050457-37052863 Glycine max
Glyma.16G211900 0.5kb upstream 0.5kb upstream 500 false Chr16: 37050457-37050956 Glycine max
Glyma.16G211900 0.5kb downstream 0.5kb downstream 2407 true Chr16: 37050957-37053363 Glycine max
Glyma.16G211900 0.5kb downstream 0.5kb downstream 500 false Chr16: 37052864-37053363 Glycine max
Glyma.16G211900 1.0kb upstream 1.0kb upstream 2907 true Chr16: 37049957-37052863 Glycine max
Glyma.16G211900 1.0kb upstream 1.0kb upstream 1000 false Chr16: 37049957-37050956 Glycine max
Glyma.16G211900 1.0kb downstream 1.0kb downstream 2907 true Chr16: 37050957-37053863 Glycine max
Glyma.16G211900 1.0kb downstream 1.0kb downstream 1000 false Chr16: 37052864-37053863 Glycine max
Glyma.16G211900 2.0kb upstream 2.0kb upstream 3907 true Chr16: 37048957-37052863 Glycine max
Glyma.16G211900 2.0kb upstream 2.0kb upstream 2000 false Chr16: 37048957-37050956 Glycine max
Glyma.16G211900 2.0kb downstream 2.0kb downstream 3907 true Chr16: 37050957-37054863 Glycine max
Glyma.16G211900 2.0kb downstream 2.0kb downstream 2000 false Chr16: 37052864-37054863 Glycine max
Glyma.16G211900 5.0kb upstream 5.0kb upstream 6907 true Chr16: 37045957-37052863 Glycine max
Glyma.16G211900 5.0kb upstream 5.0kb upstream 5000 false Chr16: 37045957-37050956 Glycine max
Glyma.16G211900 5.0kb downstream 5.0kb downstream 6907 true Chr16: 37050957-37057863 Glycine max
Glyma.16G211900 5.0kb downstream 5.0kb downstream 5000 false Chr16: 37052864-37057863 Glycine max
Glyma.16G211900 10.0kb upstream 10.0kb upstream 11907 true Chr16: 37040957-37052863 Glycine max
Glyma.16G211900 10.0kb upstream 10.0kb upstream 10000 false Chr16: 37040957-37050956 Glycine max
Glyma.16G211900 10.0kb downstream 10.0kb downstream 11907 true Chr16: 37050957-37062863 Glycine max
Glyma.16G211900 10.0kb downstream 10.0kb downstream 10000 false Chr16: 37052864-37062863 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029261 5273 Angiosperm View MSA
122246982 5265 Fabidae Singleton cluster - no MSA
124069895 5270 Rosid View MSA
123742490 5271 Pentapetalae View MSA
122795745 5272 Eudicot View MSA
121298616 5274 Embryophyte View MSA
123336578 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.43634 0.0 1.60986    
cufflinks 0.592981 0.0 2.14909    
cufflinks 0.344167 0.0 1.28185    
cufflinks 0.634949 0.0 2.2908    
cufflinks 0.419657 0.0 1.55253    
cufflinks 0.249842 0.0 0.946189 Low Low
cufflinks 1.11208 0.0 3.84223   High
cufflinks 0.726195 0.0 2.59583    
cufflinks 0.473591 0.0 1.73884    
cufflinks 0.347        
cufflinks 0.117       Low
cufflinks 0.505       High
cufflinks 0.611       High
cufflinks 0.67       High
cufflinks 0.147       Low
cufflinks 0.266        
cufflinks 0.276        
cufflinks 0.455        
cufflinks 0.52       High
cufflinks 0.244        
cufflinks 0.152       Low
cufflinks 0.286        
cufflinks 0.327        
cufflinks 0.141       Low
cufflinks 0.298        
cufflinks 0.198        

0 Strain