Gene : Glyma.16G213000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR35698:SF1 - DNA-BINDING PROTEIN RHL1 Genomic Order:  2130
Name:  ? Glyma.16G213000 Secondary Identifier:  ? PAC:30561922
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G213000 0.5kb upstream 0.5kb upstream 7366 true Chr16: 37118629-37125994 Glycine max
Glyma.16G213000 0.5kb upstream 0.5kb upstream 500 false Chr16: 37125495-37125994 Glycine max
Glyma.16G213000 0.5kb downstream 0.5kb downstream 7366 true Chr16: 37118129-37125494 Glycine max
Glyma.16G213000 0.5kb downstream 0.5kb downstream 500 false Chr16: 37118129-37118628 Glycine max
Glyma.16G213000 1.0kb upstream 1.0kb upstream 7866 true Chr16: 37118629-37126494 Glycine max
Glyma.16G213000 1.0kb upstream 1.0kb upstream 1000 false Chr16: 37125495-37126494 Glycine max
Glyma.16G213000 1.0kb downstream 1.0kb downstream 7866 true Chr16: 37117629-37125494 Glycine max
Glyma.16G213000 1.0kb downstream 1.0kb downstream 1000 false Chr16: 37117629-37118628 Glycine max
Glyma.16G213000 2.0kb upstream 2.0kb upstream 8866 true Chr16: 37118629-37127494 Glycine max
Glyma.16G213000 2.0kb upstream 2.0kb upstream 2000 false Chr16: 37125495-37127494 Glycine max
Glyma.16G213000 2.0kb downstream 2.0kb downstream 8866 true Chr16: 37116629-37125494 Glycine max
Glyma.16G213000 2.0kb downstream 2.0kb downstream 2000 false Chr16: 37116629-37118628 Glycine max
Glyma.16G213000 5.0kb upstream 5.0kb upstream 11866 true Chr16: 37118629-37130494 Glycine max
Glyma.16G213000 5.0kb upstream 5.0kb upstream 5000 false Chr16: 37125495-37130494 Glycine max
Glyma.16G213000 5.0kb downstream 5.0kb downstream 11866 true Chr16: 37113629-37125494 Glycine max
Glyma.16G213000 5.0kb downstream 5.0kb downstream 5000 false Chr16: 37113629-37118628 Glycine max
Glyma.16G213000 10.0kb upstream 10.0kb upstream 16866 true Chr16: 37118629-37135494 Glycine max
Glyma.16G213000 10.0kb upstream 10.0kb upstream 10000 false Chr16: 37125495-37135494 Glycine max
Glyma.16G213000 10.0kb downstream 10.0kb downstream 16866 true Chr16: 37108629-37125494 Glycine max
Glyma.16G213000 10.0kb downstream 10.0kb downstream 10000 false Chr16: 37108629-37118628 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308575 5265 Fabidae View MSA
124061224 5270 Rosid View MSA
123745931 5271 Pentapetalae View MSA
122792650 5272 Eudicot View MSA
122048077 5273 Angiosperm View MSA
121344975 5274 Embryophyte View MSA
123426028 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.75096 0.0 8.63238    
cufflinks 7.007 0.0 26.6313   High
cufflinks 1.56347 0.0 5.86043   Low
cufflinks 3.03125 0.0 12.0974    
cufflinks 3.10843 0.0 12.4971    
cufflinks 1.58872 0.0 7.82647   Low
cufflinks 2.53631 0.0 8.24089    
cufflinks 7.30188 0.0 23.082   High
cufflinks 2.88749 0.0 11.673    
cufflinks 0.854       High
cufflinks 0.157       Low
cufflinks 0.438        
cufflinks 0.44        
cufflinks 0.447        
cufflinks 0.21       Low
cufflinks 1.053       High
cufflinks 0.265        
cufflinks 0.415        
cufflinks 1.146       High
cufflinks 0.524        
cufflinks 0.255        
cufflinks 0.757        
cufflinks 0.901       High
cufflinks 0.17       Low
cufflinks 0.634        
cufflinks 0.266        

0 Strain