Gene : Glyma.16G172600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR24223:SF192 - ABC TRANSPORTER C FAMILY MEMBER 10 Genomic Order:  1726
Name:  ? Glyma.16G172600 Secondary Identifier:  ? PAC:30561171
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G172600 0.5kb upstream 0.5kb upstream 11358 true Chr16: 33333664-33345021 Glycine max
Glyma.16G172600 0.5kb upstream 0.5kb upstream 500 false Chr16: 33344522-33345021 Glycine max
Glyma.16G172600 0.5kb downstream 0.5kb downstream 11358 true Chr16: 33333164-33344521 Glycine max
Glyma.16G172600 0.5kb downstream 0.5kb downstream 500 false Chr16: 33333164-33333663 Glycine max
Glyma.16G172600 1.0kb upstream 1.0kb upstream 11858 true Chr16: 33333664-33345521 Glycine max
Glyma.16G172600 1.0kb upstream 1.0kb upstream 1000 false Chr16: 33344522-33345521 Glycine max
Glyma.16G172600 1.0kb downstream 1.0kb downstream 11858 true Chr16: 33332664-33344521 Glycine max
Glyma.16G172600 1.0kb downstream 1.0kb downstream 1000 false Chr16: 33332664-33333663 Glycine max
Glyma.16G172600 2.0kb upstream 2.0kb upstream 12858 true Chr16: 33333664-33346521 Glycine max
Glyma.16G172600 2.0kb upstream 2.0kb upstream 2000 false Chr16: 33344522-33346521 Glycine max
Glyma.16G172600 2.0kb downstream 2.0kb downstream 12858 true Chr16: 33331664-33344521 Glycine max
Glyma.16G172600 2.0kb downstream 2.0kb downstream 2000 false Chr16: 33331664-33333663 Glycine max
Glyma.16G172600 5.0kb upstream 5.0kb upstream 15858 true Chr16: 33333664-33349521 Glycine max
Glyma.16G172600 5.0kb upstream 5.0kb upstream 5000 false Chr16: 33344522-33349521 Glycine max
Glyma.16G172600 5.0kb downstream 5.0kb downstream 15858 true Chr16: 33328664-33344521 Glycine max
Glyma.16G172600 5.0kb downstream 5.0kb downstream 5000 false Chr16: 33328664-33333663 Glycine max
Glyma.16G172600 10.0kb upstream 10.0kb upstream 20858 true Chr16: 33333664-33354521 Glycine max
Glyma.16G172600 10.0kb upstream 10.0kb upstream 10000 false Chr16: 33344522-33354521 Glycine max
Glyma.16G172600 10.0kb downstream 10.0kb downstream 20858 true Chr16: 33323664-33344521 Glycine max
Glyma.16G172600 10.0kb downstream 10.0kb downstream 10000 false Chr16: 33323664-33333663 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121655830 5273 Angiosperm View MSA
122296481 5265 Fabidae View MSA
124035663 5270 Rosid View MSA
123609146 5271 Pentapetalae View MSA
122643796 5272 Eudicot View MSA
120927929 5274 Embryophyte View MSA
122968571 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.32624 0.0 3.97538    
cufflinks 0.438326 0.0 1.51569   Low
cufflinks 3.23971 0.0 8.7984    
cufflinks 0.987712 0.0 3.07773    
cufflinks 1.10129 0.0 3.39583    
cufflinks 2.32998 0.0 6.51291    
cufflinks 16.9905 0.0 47.8015   High
cufflinks 0.984093 0.0 3.06795    
cufflinks 4.41562 0.0 11.8427    
cufflinks 0.142       Low
cufflinks 0.22       Low
cufflinks 3.222        
cufflinks 0.836        
cufflinks 0.56        
cufflinks 0.801        
cufflinks 2.811        
cufflinks 3.708        
cufflinks 4.569       High
cufflinks 1.906        
cufflinks 2.065        
cufflinks 0.286       Low
cufflinks 3.712        
cufflinks 7.638     High High
cufflinks 0.286       Low
cufflinks 3.588        
cufflinks 0.241       Low

0 Strain