Gene : Glyma.16G118600 G. max Wm82.a2.v1
Defline:  (1 of 58) PTHR11017//PTHR11017:SF163 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN Genomic Order:  1186
Name:  ? Glyma.16G118600 Secondary Identifier:  ? PAC:30562253
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G118600 0.5kb upstream 0.5kb upstream 4229 true Chr16: 26441694-26445922 Glycine max
Glyma.16G118600 0.5kb upstream 0.5kb upstream 500 false Chr16: 26441694-26442193 Glycine max
Glyma.16G118600 0.5kb downstream 0.5kb downstream 4229 true Chr16: 26442194-26446422 Glycine max
Glyma.16G118600 0.5kb downstream 0.5kb downstream 500 false Chr16: 26445923-26446422 Glycine max
Glyma.16G118600 1.0kb upstream 1.0kb upstream 4729 true Chr16: 26441194-26445922 Glycine max
Glyma.16G118600 1.0kb upstream 1.0kb upstream 1000 false Chr16: 26441194-26442193 Glycine max
Glyma.16G118600 1.0kb downstream 1.0kb downstream 4729 true Chr16: 26442194-26446922 Glycine max
Glyma.16G118600 1.0kb downstream 1.0kb downstream 1000 false Chr16: 26445923-26446922 Glycine max
Glyma.16G118600 2.0kb upstream 2.0kb upstream 5729 true Chr16: 26440194-26445922 Glycine max
Glyma.16G118600 2.0kb upstream 2.0kb upstream 2000 false Chr16: 26440194-26442193 Glycine max
Glyma.16G118600 2.0kb downstream 2.0kb downstream 5729 true Chr16: 26442194-26447922 Glycine max
Glyma.16G118600 2.0kb downstream 2.0kb downstream 2000 false Chr16: 26445923-26447922 Glycine max
Glyma.16G118600 5.0kb upstream 5.0kb upstream 8729 true Chr16: 26437194-26445922 Glycine max
Glyma.16G118600 5.0kb upstream 5.0kb upstream 5000 false Chr16: 26437194-26442193 Glycine max
Glyma.16G118600 5.0kb downstream 5.0kb downstream 8729 true Chr16: 26442194-26450922 Glycine max
Glyma.16G118600 5.0kb downstream 5.0kb downstream 5000 false Chr16: 26445923-26450922 Glycine max
Glyma.16G118600 10.0kb upstream 10.0kb upstream 13729 true Chr16: 26432194-26445922 Glycine max
Glyma.16G118600 10.0kb upstream 10.0kb upstream 10000 false Chr16: 26432194-26442193 Glycine max
Glyma.16G118600 10.0kb downstream 10.0kb downstream 13729 true Chr16: 26442194-26455922 Glycine max
Glyma.16G118600 10.0kb downstream 10.0kb downstream 10000 false Chr16: 26445923-26455922 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121618134 5273 Angiosperm View MSA
122255063 5265 Fabidae View MSA
123996948 5270 Rosid View MSA
123571324 5271 Pentapetalae View MSA
122606050 5272 Eudicot View MSA
120890250 5274 Embryophyte View MSA
122930916 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0143275 0.0 0.0641493 Low  
cufflinks 0.0224812 0.0 0.0941279 Low  
cufflinks 0.00392469 0.0 0.0246838 Low Low
cufflinks 0.977777 0.0 4.96226    
cufflinks 8.15419 0.0 25.219   High
cufflinks 0.0200804 0.0 0.0857583 Low  
cufflinks 0.0146441 0.0 0.0645023 Low  
cufflinks 1.64874 0.0 7.13228   High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.964       High
cufflinks 0.009     Low  
cufflinks 1.898        
cufflinks 1.906        
cufflinks 0.132        
cufflinks 0.008     Low  
cufflinks 0.754        
cufflinks 0.012     Low  
cufflinks 0.004     Low Low
cufflinks 0.002     Low Low
cufflinks 1.859        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.05       High
cufflinks 0.003     Low Low
cufflinks 2.747        

0 Strain