Gene : Glyma.16G107200 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR12411:SF371 - CATHEPSIN O Genomic Order:  1072
Name:  ? Glyma.16G107200 Secondary Identifier:  ? PAC:30558816
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G107200 0.5kb upstream 0.5kb upstream 4115 true Chr16: 21752271-21756385 Glycine max
Glyma.16G107200 0.5kb upstream 0.5kb upstream 500 false Chr16: 21752271-21752770 Glycine max
Glyma.16G107200 0.5kb downstream 0.5kb downstream 4115 true Chr16: 21752771-21756885 Glycine max
Glyma.16G107200 0.5kb downstream 0.5kb downstream 500 false Chr16: 21756386-21756885 Glycine max
Glyma.16G107200 1.0kb upstream 1.0kb upstream 4615 true Chr16: 21751771-21756385 Glycine max
Glyma.16G107200 1.0kb upstream 1.0kb upstream 1000 false Chr16: 21751771-21752770 Glycine max
Glyma.16G107200 1.0kb downstream 1.0kb downstream 4615 true Chr16: 21752771-21757385 Glycine max
Glyma.16G107200 1.0kb downstream 1.0kb downstream 1000 false Chr16: 21756386-21757385 Glycine max
Glyma.16G107200 2.0kb upstream 2.0kb upstream 5615 true Chr16: 21750771-21756385 Glycine max
Glyma.16G107200 2.0kb upstream 2.0kb upstream 2000 false Chr16: 21750771-21752770 Glycine max
Glyma.16G107200 2.0kb downstream 2.0kb downstream 5615 true Chr16: 21752771-21758385 Glycine max
Glyma.16G107200 2.0kb downstream 2.0kb downstream 2000 false Chr16: 21756386-21758385 Glycine max
Glyma.16G107200 5.0kb upstream 5.0kb upstream 8615 true Chr16: 21747771-21756385 Glycine max
Glyma.16G107200 5.0kb upstream 5.0kb upstream 5000 false Chr16: 21747771-21752770 Glycine max
Glyma.16G107200 5.0kb downstream 5.0kb downstream 8615 true Chr16: 21752771-21761385 Glycine max
Glyma.16G107200 5.0kb downstream 5.0kb downstream 5000 false Chr16: 21756386-21761385 Glycine max
Glyma.16G107200 10.0kb upstream 10.0kb upstream 13615 true Chr16: 21742771-21756385 Glycine max
Glyma.16G107200 10.0kb upstream 10.0kb upstream 10000 false Chr16: 21742771-21752770 Glycine max
Glyma.16G107200 10.0kb downstream 10.0kb downstream 13615 true Chr16: 21752771-21766385 Glycine max
Glyma.16G107200 10.0kb downstream 10.0kb downstream 10000 false Chr16: 21756386-21766385 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780807 5273 Angiosperm View MSA
122297847 5265 Fabidae View MSA
124036180 5270 Rosid View MSA
123747945 5271 Pentapetalae View MSA
122772367 5272 Eudicot View MSA
121052407 5274 Embryophyte View MSA
123092456 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.115435 0.0 0.462124 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0113333 0.0 0.0536206 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.066191 0.0 0.271992 Low  
cufflinks 1.63141 0.0 5.74565   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.341016 0.0 1.30838    
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.147       High
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  

0 Strain