Gene : Glyma.16G039900 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR10527//PTHR10527:SF29 - IMPORTIN BETA Genomic Order:  399
Name:  ? Glyma.16G039900 Secondary Identifier:  ? PAC:30558831
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G039900 0.5kb upstream 0.5kb upstream 10487 true Chr16: 3738039-3748525 Glycine max
Glyma.16G039900 0.5kb upstream 0.5kb upstream 500 false Chr16: 3738039-3738538 Glycine max
Glyma.16G039900 0.5kb downstream 0.5kb downstream 10487 true Chr16: 3738539-3749025 Glycine max
Glyma.16G039900 0.5kb downstream 0.5kb downstream 500 false Chr16: 3748526-3749025 Glycine max
Glyma.16G039900 1.0kb upstream 1.0kb upstream 10987 true Chr16: 3737539-3748525 Glycine max
Glyma.16G039900 1.0kb upstream 1.0kb upstream 1000 false Chr16: 3737539-3738538 Glycine max
Glyma.16G039900 1.0kb downstream 1.0kb downstream 10987 true Chr16: 3738539-3749525 Glycine max
Glyma.16G039900 1.0kb downstream 1.0kb downstream 1000 false Chr16: 3748526-3749525 Glycine max
Glyma.16G039900 2.0kb upstream 2.0kb upstream 11987 true Chr16: 3736539-3748525 Glycine max
Glyma.16G039900 2.0kb upstream 2.0kb upstream 2000 false Chr16: 3736539-3738538 Glycine max
Glyma.16G039900 2.0kb downstream 2.0kb downstream 11987 true Chr16: 3738539-3750525 Glycine max
Glyma.16G039900 2.0kb downstream 2.0kb downstream 2000 false Chr16: 3748526-3750525 Glycine max
Glyma.16G039900 5.0kb upstream 5.0kb upstream 14987 true Chr16: 3733539-3748525 Glycine max
Glyma.16G039900 5.0kb upstream 5.0kb upstream 5000 false Chr16: 3733539-3738538 Glycine max
Glyma.16G039900 5.0kb downstream 5.0kb downstream 14987 true Chr16: 3738539-3753525 Glycine max
Glyma.16G039900 5.0kb downstream 5.0kb downstream 5000 false Chr16: 3748526-3753525 Glycine max
Glyma.16G039900 10.0kb upstream 10.0kb upstream 19987 true Chr16: 3728539-3748525 Glycine max
Glyma.16G039900 10.0kb upstream 10.0kb upstream 10000 false Chr16: 3728539-3738538 Glycine max
Glyma.16G039900 10.0kb downstream 10.0kb downstream 19987 true Chr16: 3738539-3758525 Glycine max
Glyma.16G039900 10.0kb downstream 10.0kb downstream 10000 false Chr16: 3748526-3758525 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302052 5265 Fabidae View MSA
124071324 5270 Rosid View MSA
123743954 5271 Pentapetalae View MSA
122786465 5272 Eudicot View MSA
122043271 5273 Angiosperm View MSA
121344814 5274 Embryophyte View MSA
123426355 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.2394 0.0 35.5922   High
cufflinks 6.02054 0.0 20.7667   Low
cufflinks 10.078 0.0 34.9694   High
cufflinks 9.15178 0.0 31.5256    
cufflinks 8.51947 0.0 29.322    
cufflinks 5.61287 0.0 19.4246   Low
cufflinks 5.91427 0.0 20.4249   Low
cufflinks 8.23303 0.0 28.2429    
cufflinks 8.37297 0.0 28.7972    
cufflinks 1.856        
cufflinks 1.692        
cufflinks 1.953        
cufflinks 1.497        
cufflinks 1.654        
cufflinks 1.585        
cufflinks 1.546        
cufflinks 3.443       High
cufflinks 1.305       Low
cufflinks 1.765        
cufflinks 1.531        
cufflinks 1.925        
cufflinks 1.513        
cufflinks 1.512        
cufflinks 2.146        
cufflinks 1.552        
cufflinks 2.565       High

0 Strain