Gene : Glyma.16G041200 G. max Wm82.a2.v1
Defline:  (1 of 6) 1.4.1.3 - Glutamate dehydrogenase (NAD(P)(+)) / Glutamic dehydrogenase Genomic Order:  412
Name:  ? Glyma.16G041200 Secondary Identifier:  ? PAC:30558995
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ARGININE-SYN4-PWY Glycine max pathologic  
Gmax GLUDEG-I-PWY Glycine max pathologic  
Gmax GLUTAMATE-DEG1-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G041200 0.5kb upstream 0.5kb upstream 8354 true Chr16: 3860927-3869280 Glycine max
Glyma.16G041200 0.5kb upstream 0.5kb upstream 500 false Chr16: 3860927-3861426 Glycine max
Glyma.16G041200 0.5kb downstream 0.5kb downstream 8354 true Chr16: 3861427-3869780 Glycine max
Glyma.16G041200 0.5kb downstream 0.5kb downstream 500 false Chr16: 3869281-3869780 Glycine max
Glyma.16G041200 1.0kb upstream 1.0kb upstream 8854 true Chr16: 3860427-3869280 Glycine max
Glyma.16G041200 1.0kb upstream 1.0kb upstream 1000 false Chr16: 3860427-3861426 Glycine max
Glyma.16G041200 1.0kb downstream 1.0kb downstream 8854 true Chr16: 3861427-3870280 Glycine max
Glyma.16G041200 1.0kb downstream 1.0kb downstream 1000 false Chr16: 3869281-3870280 Glycine max
Glyma.16G041200 2.0kb upstream 2.0kb upstream 9854 true Chr16: 3859427-3869280 Glycine max
Glyma.16G041200 2.0kb upstream 2.0kb upstream 2000 false Chr16: 3859427-3861426 Glycine max
Glyma.16G041200 2.0kb downstream 2.0kb downstream 9854 true Chr16: 3861427-3871280 Glycine max
Glyma.16G041200 2.0kb downstream 2.0kb downstream 2000 false Chr16: 3869281-3871280 Glycine max
Glyma.16G041200 5.0kb upstream 5.0kb upstream 12854 true Chr16: 3856427-3869280 Glycine max
Glyma.16G041200 5.0kb upstream 5.0kb upstream 5000 false Chr16: 3856427-3861426 Glycine max
Glyma.16G041200 5.0kb downstream 5.0kb downstream 12854 true Chr16: 3861427-3874280 Glycine max
Glyma.16G041200 5.0kb downstream 5.0kb downstream 5000 false Chr16: 3869281-3874280 Glycine max
Glyma.16G041200 10.0kb upstream 10.0kb upstream 17854 true Chr16: 3851427-3869280 Glycine max
Glyma.16G041200 10.0kb upstream 10.0kb upstream 10000 false Chr16: 3851427-3861426 Glycine max
Glyma.16G041200 10.0kb downstream 10.0kb downstream 17854 true Chr16: 3861427-3879280 Glycine max
Glyma.16G041200 10.0kb downstream 10.0kb downstream 10000 false Chr16: 3869281-3879280 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313991 5265 Fabidae View MSA
124067187 5270 Rosid View MSA
123747810 5271 Pentapetalae View MSA
122788460 5272 Eudicot View MSA
122043764 5273 Angiosperm View MSA
121350758 5274 Embryophyte View MSA
123427828 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.0253 0.0 175.929 High  
cufflinks 28.7756 0.0 117.068 High  
cufflinks 179.06 0.0 1555.76 High High
cufflinks 18.6388 0.0 71.3312   Low
cufflinks 19.7352 0.0 70.2619   Low
cufflinks 92.4163 0.0 436.801 High  
cufflinks 38.2045 0.0 159.205 High  
cufflinks 28.6141 0.0 114.778 High  
cufflinks 86.5534 0.0 426.309 High  
cufflinks 2.919        
cufflinks 42.554     High High
cufflinks 11.886     High  
cufflinks 5.566        
cufflinks 5.822        
cufflinks 16.727     High  
cufflinks 2.298       Low
cufflinks 6.562     High  
cufflinks 4.147        
cufflinks 2.774        
cufflinks 2.897        
cufflinks 21.29     High High
cufflinks 2.364        
cufflinks 1.81       Low
cufflinks 43.407     High High
cufflinks 2.891        
cufflinks 11.142     High  

0 Strain