Gene : Glyma.16G004700 G. max Wm82.a2.v1
Defline:  (1 of 18) PTHR10052 - 60S RIBOSOMAL PROTEIN L18A Genomic Order:  47
Name:  ? Glyma.16G004700 Secondary Identifier:  ? PAC:30561900
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G004700 0.5kb upstream 0.5kb upstream 4241 true Chr16: 263014-267254 Glycine max
Glyma.16G004700 0.5kb upstream 0.5kb upstream 500 false Chr16: 266755-267254 Glycine max
Glyma.16G004700 0.5kb downstream 0.5kb downstream 4241 true Chr16: 262514-266754 Glycine max
Glyma.16G004700 0.5kb downstream 0.5kb downstream 500 false Chr16: 262514-263013 Glycine max
Glyma.16G004700 1.0kb upstream 1.0kb upstream 4741 true Chr16: 263014-267754 Glycine max
Glyma.16G004700 1.0kb upstream 1.0kb upstream 1000 false Chr16: 266755-267754 Glycine max
Glyma.16G004700 1.0kb downstream 1.0kb downstream 4741 true Chr16: 262014-266754 Glycine max
Glyma.16G004700 1.0kb downstream 1.0kb downstream 1000 false Chr16: 262014-263013 Glycine max
Glyma.16G004700 2.0kb upstream 2.0kb upstream 5741 true Chr16: 263014-268754 Glycine max
Glyma.16G004700 2.0kb upstream 2.0kb upstream 2000 false Chr16: 266755-268754 Glycine max
Glyma.16G004700 2.0kb downstream 2.0kb downstream 5741 true Chr16: 261014-266754 Glycine max
Glyma.16G004700 2.0kb downstream 2.0kb downstream 2000 false Chr16: 261014-263013 Glycine max
Glyma.16G004700 5.0kb upstream 5.0kb upstream 8741 true Chr16: 263014-271754 Glycine max
Glyma.16G004700 5.0kb upstream 5.0kb upstream 5000 false Chr16: 266755-271754 Glycine max
Glyma.16G004700 5.0kb downstream 5.0kb downstream 8741 true Chr16: 258014-266754 Glycine max
Glyma.16G004700 5.0kb downstream 5.0kb downstream 5000 false Chr16: 258014-263013 Glycine max
Glyma.16G004700 10.0kb upstream 10.0kb upstream 13741 true Chr16: 263014-276754 Glycine max
Glyma.16G004700 10.0kb upstream 10.0kb upstream 10000 false Chr16: 266755-276754 Glycine max
Glyma.16G004700 10.0kb downstream 10.0kb downstream 13741 true Chr16: 253014-266754 Glycine max
Glyma.16G004700 10.0kb downstream 10.0kb downstream 10000 false Chr16: 253014-263013 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027441 5273 Angiosperm View MSA
122307579 5265 Fabidae View MSA
124063459 5270 Rosid View MSA
123745455 5271 Pentapetalae View MSA
122796236 5272 Eudicot View MSA
121350597 5274 Embryophyte View MSA
123425775 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.64242 0.0 21.5678   High
cufflinks 2.05928 0.0 18.1157    
cufflinks 1.99333 0.0 15.1148    
cufflinks 1.81574 0.0 14.4008    
cufflinks 1.20613 0.0 11.2111   Low
cufflinks 1.34566 0.0 11.3016   Low
cufflinks 1.73714 0.0 9.83498    
cufflinks 1.94859 0.0 13.36    
cufflinks 1.81983 0.0 14.7568    
cufflinks 0.097     Low  
cufflinks 0.123        
cufflinks 0.27       High
cufflinks 0.096        
cufflinks 0.12        
cufflinks 0.081       Low
cufflinks 0.163        
cufflinks 0.06     Low Low
cufflinks 0.376       High
cufflinks 0.197        
cufflinks 0.185        
cufflinks 0.076       Low
cufflinks 0.229       High
cufflinks 0.148        
cufflinks 0.133        
cufflinks 0.197        
cufflinks 0.073       Low

0 Strain