Gene : Glyma.16G006500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR21717:SF25 - MYB FAMILY TRANSCRIPTION FACTOR TRFL6-RELATED Genomic Order:  65
Name:  ? Glyma.16G006500 Secondary Identifier:  ? PAC:30562034
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G006500 0.5kb upstream 0.5kb upstream 8749 true Chr16: 523399-532147 Glycine max
Glyma.16G006500 0.5kb upstream 0.5kb upstream 500 false Chr16: 531648-532147 Glycine max
Glyma.16G006500 0.5kb downstream 0.5kb downstream 8749 true Chr16: 522899-531647 Glycine max
Glyma.16G006500 0.5kb downstream 0.5kb downstream 500 false Chr16: 522899-523398 Glycine max
Glyma.16G006500 1.0kb upstream 1.0kb upstream 9249 true Chr16: 523399-532647 Glycine max
Glyma.16G006500 1.0kb upstream 1.0kb upstream 1000 false Chr16: 531648-532647 Glycine max
Glyma.16G006500 1.0kb downstream 1.0kb downstream 9249 true Chr16: 522399-531647 Glycine max
Glyma.16G006500 1.0kb downstream 1.0kb downstream 1000 false Chr16: 522399-523398 Glycine max
Glyma.16G006500 2.0kb upstream 2.0kb upstream 10249 true Chr16: 523399-533647 Glycine max
Glyma.16G006500 2.0kb upstream 2.0kb upstream 2000 false Chr16: 531648-533647 Glycine max
Glyma.16G006500 2.0kb downstream 2.0kb downstream 10249 true Chr16: 521399-531647 Glycine max
Glyma.16G006500 2.0kb downstream 2.0kb downstream 2000 false Chr16: 521399-523398 Glycine max
Glyma.16G006500 5.0kb upstream 5.0kb upstream 13249 true Chr16: 523399-536647 Glycine max
Glyma.16G006500 5.0kb upstream 5.0kb upstream 5000 false Chr16: 531648-536647 Glycine max
Glyma.16G006500 5.0kb downstream 5.0kb downstream 13249 true Chr16: 518399-531647 Glycine max
Glyma.16G006500 5.0kb downstream 5.0kb downstream 5000 false Chr16: 518399-523398 Glycine max
Glyma.16G006500 10.0kb upstream 10.0kb upstream 18249 true Chr16: 523399-541647 Glycine max
Glyma.16G006500 10.0kb upstream 10.0kb upstream 10000 false Chr16: 531648-541647 Glycine max
Glyma.16G006500 10.0kb downstream 10.0kb downstream 18249 true Chr16: 513399-531647 Glycine max
Glyma.16G006500 10.0kb downstream 10.0kb downstream 10000 false Chr16: 513399-523398 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308563 5265 Fabidae View MSA
124061716 5270 Rosid View MSA
123747162 5271 Pentapetalae View MSA
122792164 5272 Eudicot View MSA
122046145 5273 Angiosperm View MSA
123429070 5275 Viridiplantae View MSA
121348022 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.382 0.0 46.9163    
cufflinks 11.0811 0.0 60.5649    
cufflinks 6.46188 0.0 29.6144    
cufflinks 8.68961 0.0 39.1873    
cufflinks 5.00229 0.0 24.2335   Low
cufflinks 4.21134 0.0 22.6358   Low
cufflinks 13.3751 0.0 67.6487   High
cufflinks 6.10214 0.0 28.3738    
cufflinks 11.6733 0.0 59.1711    
cufflinks 0.219        
cufflinks 0.06       Low
cufflinks 0.445        
cufflinks 0.177        
cufflinks 0.162        
cufflinks 0.314        
cufflinks 0.47        
cufflinks 0.188        
cufflinks 0.6       High
cufflinks 0.455        
cufflinks 0.556       High
cufflinks 0.083       Low
cufflinks 0.561       High
cufflinks 0.497        
cufflinks 0.091       Low
cufflinks 0.512        
cufflinks 0.182        

0 Strain