Gene : Glyma.15G228800 G. max Wm82.a2.v1
Defline:  (1 of 14) PTHR23322 - FAS-ASSOCIATED PROTEIN Genomic Order:  2288
Name:  ? Glyma.15G228800 Secondary Identifier:  ? PAC:30497538
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G228800 0.5kb upstream 0.5kb upstream 4459 true Chr15: 42801390-42805848 Glycine max
Glyma.15G228800 0.5kb upstream 0.5kb upstream 500 false Chr15: 42805349-42805848 Glycine max
Glyma.15G228800 0.5kb downstream 0.5kb downstream 4459 true Chr15: 42800890-42805348 Glycine max
Glyma.15G228800 0.5kb downstream 0.5kb downstream 500 false Chr15: 42800890-42801389 Glycine max
Glyma.15G228800 1.0kb upstream 1.0kb upstream 4959 true Chr15: 42801390-42806348 Glycine max
Glyma.15G228800 1.0kb upstream 1.0kb upstream 1000 false Chr15: 42805349-42806348 Glycine max
Glyma.15G228800 1.0kb downstream 1.0kb downstream 4959 true Chr15: 42800390-42805348 Glycine max
Glyma.15G228800 1.0kb downstream 1.0kb downstream 1000 false Chr15: 42800390-42801389 Glycine max
Glyma.15G228800 2.0kb upstream 2.0kb upstream 5959 true Chr15: 42801390-42807348 Glycine max
Glyma.15G228800 2.0kb upstream 2.0kb upstream 2000 false Chr15: 42805349-42807348 Glycine max
Glyma.15G228800 2.0kb downstream 2.0kb downstream 5959 true Chr15: 42799390-42805348 Glycine max
Glyma.15G228800 2.0kb downstream 2.0kb downstream 2000 false Chr15: 42799390-42801389 Glycine max
Glyma.15G228800 5.0kb upstream 5.0kb upstream 8959 true Chr15: 42801390-42810348 Glycine max
Glyma.15G228800 5.0kb upstream 5.0kb upstream 5000 false Chr15: 42805349-42810348 Glycine max
Glyma.15G228800 5.0kb downstream 5.0kb downstream 8959 true Chr15: 42796390-42805348 Glycine max
Glyma.15G228800 5.0kb downstream 5.0kb downstream 5000 false Chr15: 42796390-42801389 Glycine max
Glyma.15G228800 10.0kb upstream 10.0kb upstream 13959 true Chr15: 42801390-42815348 Glycine max
Glyma.15G228800 10.0kb upstream 10.0kb upstream 10000 false Chr15: 42805349-42815348 Glycine max
Glyma.15G228800 10.0kb downstream 10.0kb downstream 13959 true Chr15: 42791390-42805348 Glycine max
Glyma.15G228800 10.0kb downstream 10.0kb downstream 10000 false Chr15: 42791390-42801389 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121615558 5273 Angiosperm View MSA
122250635 5265 Fabidae View MSA
123993760 5270 Rosid View MSA
123568492 5271 Pentapetalae View MSA
122603236 5272 Eudicot View MSA
120887748 5274 Embryophyte View MSA
122928502 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.132208 0.0 0.532773 Low  
cufflinks 0.148391 0.0 0.600736 Low  
cufflinks 1.11875 0.0 7.27661   High
cufflinks 0.0294189 0.0 0.146419 Low  
cufflinks 0.0271336 0.0 0.145721 Low  
cufflinks 0.00976095 0.0 0.0601873 Low Low
cufflinks 0.415997 0.0 3.1621   High
cufflinks 0.0339601 0.0 0.173812 Low  
cufflinks 0.0200109 0.0 0.142524 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.042     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.066     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.045     Low  
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain