Gene : Glyma.15G211800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10791//PTHR10791:SF57 - RAG1-ACTIVATING PROTEIN 1 Genomic Order:  2118
Name:  ? Glyma.15G211800 Secondary Identifier:  ? PAC:30498798
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G211800 0.5kb upstream 0.5kb upstream 3509 true Chr15: 32835023-32838531 Glycine max
Glyma.15G211800 0.5kb upstream 0.5kb upstream 500 false Chr15: 32838032-32838531 Glycine max
Glyma.15G211800 0.5kb downstream 0.5kb downstream 3509 true Chr15: 32834523-32838031 Glycine max
Glyma.15G211800 0.5kb downstream 0.5kb downstream 500 false Chr15: 32834523-32835022 Glycine max
Glyma.15G211800 1.0kb upstream 1.0kb upstream 4009 true Chr15: 32835023-32839031 Glycine max
Glyma.15G211800 1.0kb upstream 1.0kb upstream 1000 false Chr15: 32838032-32839031 Glycine max
Glyma.15G211800 1.0kb downstream 1.0kb downstream 4009 true Chr15: 32834023-32838031 Glycine max
Glyma.15G211800 1.0kb downstream 1.0kb downstream 1000 false Chr15: 32834023-32835022 Glycine max
Glyma.15G211800 2.0kb upstream 2.0kb upstream 5009 true Chr15: 32835023-32840031 Glycine max
Glyma.15G211800 2.0kb upstream 2.0kb upstream 2000 false Chr15: 32838032-32840031 Glycine max
Glyma.15G211800 2.0kb downstream 2.0kb downstream 5009 true Chr15: 32833023-32838031 Glycine max
Glyma.15G211800 2.0kb downstream 2.0kb downstream 2000 false Chr15: 32833023-32835022 Glycine max
Glyma.15G211800 5.0kb upstream 5.0kb upstream 8009 true Chr15: 32835023-32843031 Glycine max
Glyma.15G211800 5.0kb upstream 5.0kb upstream 5000 false Chr15: 32838032-32843031 Glycine max
Glyma.15G211800 5.0kb downstream 5.0kb downstream 8009 true Chr15: 32830023-32838031 Glycine max
Glyma.15G211800 5.0kb downstream 5.0kb downstream 5000 false Chr15: 32830023-32835022 Glycine max
Glyma.15G211800 10.0kb upstream 10.0kb upstream 13009 true Chr15: 32835023-32848031 Glycine max
Glyma.15G211800 10.0kb upstream 10.0kb upstream 10000 false Chr15: 32838032-32848031 Glycine max
Glyma.15G211800 10.0kb downstream 10.0kb downstream 13009 true Chr15: 32825023-32838031 Glycine max
Glyma.15G211800 10.0kb downstream 10.0kb downstream 10000 false Chr15: 32825023-32835022 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311090 5265 Fabidae View MSA
124072962 5270 Rosid View MSA
123749486 5271 Pentapetalae View MSA
122796562 5272 Eudicot View MSA
122048091 5273 Angiosperm View MSA
121310847 5274 Embryophyte View MSA
123348232 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.83266 0.0 47.5353    
cufflinks 9.96392 0.0 43.5899    
cufflinks 17.8228 0.0 77.9216   High
cufflinks 9.08852 0.0 46.2778    
cufflinks 8.11297 0.0 37.2264   Low
cufflinks 15.1417 0.0 59.8198   High
cufflinks 13.5207 0.0 53.9465    
cufflinks 11.9822 0.0 50.9749    
cufflinks 10.7574 0.0 49.8528    
cufflinks 0.634        
cufflinks 0.371       Low
cufflinks 0.918       High
cufflinks 0.829        
cufflinks 0.48        
cufflinks 0.502        
cufflinks 0.921       High
cufflinks 0.548        
cufflinks 0.949       High
cufflinks 0.805        
cufflinks 0.836        
cufflinks 0.443       Low
cufflinks 0.765        
cufflinks 0.791        
cufflinks 0.385       Low
cufflinks 0.867        
cufflinks 0.626        

0 Strain