Gene : Glyma.15G176600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR15288:SF4 - DENN (AEX-3) DOMAIN-CONTAINING PROTEIN Genomic Order:  1766
Name:  ? Glyma.15G176600 Secondary Identifier:  ? PAC:30496674
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G176600 0.5kb upstream 0.5kb upstream 15084 true Chr15: 16739500-16754583 Glycine max
Glyma.15G176600 0.5kb upstream 0.5kb upstream 500 false Chr15: 16754084-16754583 Glycine max
Glyma.15G176600 0.5kb downstream 0.5kb downstream 15084 true Chr15: 16739000-16754083 Glycine max
Glyma.15G176600 0.5kb downstream 0.5kb downstream 500 false Chr15: 16739000-16739499 Glycine max
Glyma.15G176600 1.0kb upstream 1.0kb upstream 15584 true Chr15: 16739500-16755083 Glycine max
Glyma.15G176600 1.0kb upstream 1.0kb upstream 1000 false Chr15: 16754084-16755083 Glycine max
Glyma.15G176600 1.0kb downstream 1.0kb downstream 15584 true Chr15: 16738500-16754083 Glycine max
Glyma.15G176600 1.0kb downstream 1.0kb downstream 1000 false Chr15: 16738500-16739499 Glycine max
Glyma.15G176600 2.0kb upstream 2.0kb upstream 16584 true Chr15: 16739500-16756083 Glycine max
Glyma.15G176600 2.0kb upstream 2.0kb upstream 2000 false Chr15: 16754084-16756083 Glycine max
Glyma.15G176600 2.0kb downstream 2.0kb downstream 16584 true Chr15: 16737500-16754083 Glycine max
Glyma.15G176600 2.0kb downstream 2.0kb downstream 2000 false Chr15: 16737500-16739499 Glycine max
Glyma.15G176600 5.0kb upstream 5.0kb upstream 19584 true Chr15: 16739500-16759083 Glycine max
Glyma.15G176600 5.0kb upstream 5.0kb upstream 5000 false Chr15: 16754084-16759083 Glycine max
Glyma.15G176600 5.0kb downstream 5.0kb downstream 19584 true Chr15: 16734500-16754083 Glycine max
Glyma.15G176600 5.0kb downstream 5.0kb downstream 5000 false Chr15: 16734500-16739499 Glycine max
Glyma.15G176600 10.0kb upstream 10.0kb upstream 24584 true Chr15: 16739500-16764083 Glycine max
Glyma.15G176600 10.0kb upstream 10.0kb upstream 10000 false Chr15: 16754084-16764083 Glycine max
Glyma.15G176600 10.0kb downstream 10.0kb downstream 24584 true Chr15: 16729500-16754083 Glycine max
Glyma.15G176600 10.0kb downstream 10.0kb downstream 10000 false Chr15: 16729500-16739499 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299335 5265 Fabidae View MSA
124069833 5270 Rosid View MSA
123750815 5271 Pentapetalae View MSA
122793034 5272 Eudicot View MSA
122046513 5273 Angiosperm View MSA
121343794 5274 Embryophyte View MSA
123425012 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.3921 0.0 30.4119    
cufflinks 4.13876 0.0 11.4803   Low
cufflinks 14.374 0.0 38.6533   High
cufflinks 10.94 0.0 29.2011    
cufflinks 6.02396 0.0 16.3015    
cufflinks 10.7317 0.0 28.6373    
cufflinks 5.65979 0.0 15.3867    
cufflinks 8.51456 0.0 22.7445    
cufflinks 9.351 0.0 24.9531    
cufflinks 1.018       Low
cufflinks 9.15     High High
cufflinks 2.135        
cufflinks 1.729        
cufflinks 1.174       Low
cufflinks 4.77        
cufflinks 2.598        
cufflinks 1.608        
cufflinks 2.011        
cufflinks 1.337       Low
cufflinks 6.492       High
cufflinks 4.715        
cufflinks 3.448        
cufflinks 1.158       Low
cufflinks 6.529     High High
cufflinks 4.971        
cufflinks 2.886        

0 Strain