Gene : Glyma.15G142400 G. max Wm82.a2.v1
Defline:  (1 of 124) 3.2.1.39 - Glucan endo-1,3-beta-D-glucosidase / Laminarinase Genomic Order:  1424
Name:  ? Glyma.15G142400 Secondary Identifier:  ? PAC:30499835
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G142400 0.5kb upstream 0.5kb upstream 2571 true Chr15: 11648970-11651540 Glycine max
Glyma.15G142400 0.5kb upstream 0.5kb upstream 500 false Chr15: 11648970-11649469 Glycine max
Glyma.15G142400 0.5kb downstream 0.5kb downstream 2571 true Chr15: 11649470-11652040 Glycine max
Glyma.15G142400 0.5kb downstream 0.5kb downstream 500 false Chr15: 11651541-11652040 Glycine max
Glyma.15G142400 1.0kb upstream 1.0kb upstream 3071 true Chr15: 11648470-11651540 Glycine max
Glyma.15G142400 1.0kb upstream 1.0kb upstream 1000 false Chr15: 11648470-11649469 Glycine max
Glyma.15G142400 1.0kb downstream 1.0kb downstream 3071 true Chr15: 11649470-11652540 Glycine max
Glyma.15G142400 1.0kb downstream 1.0kb downstream 1000 false Chr15: 11651541-11652540 Glycine max
Glyma.15G142400 2.0kb upstream 2.0kb upstream 4071 true Chr15: 11647470-11651540 Glycine max
Glyma.15G142400 2.0kb upstream 2.0kb upstream 2000 false Chr15: 11647470-11649469 Glycine max
Glyma.15G142400 2.0kb downstream 2.0kb downstream 4071 true Chr15: 11649470-11653540 Glycine max
Glyma.15G142400 2.0kb downstream 2.0kb downstream 2000 false Chr15: 11651541-11653540 Glycine max
Glyma.15G142400 5.0kb upstream 5.0kb upstream 7071 true Chr15: 11644470-11651540 Glycine max
Glyma.15G142400 5.0kb upstream 5.0kb upstream 5000 false Chr15: 11644470-11649469 Glycine max
Glyma.15G142400 5.0kb downstream 5.0kb downstream 7071 true Chr15: 11649470-11656540 Glycine max
Glyma.15G142400 5.0kb downstream 5.0kb downstream 5000 false Chr15: 11651541-11656540 Glycine max
Glyma.15G142400 10.0kb upstream 10.0kb upstream 12071 true Chr15: 11639470-11651540 Glycine max
Glyma.15G142400 10.0kb upstream 10.0kb upstream 10000 false Chr15: 11639470-11649469 Glycine max
Glyma.15G142400 10.0kb downstream 10.0kb downstream 12071 true Chr15: 11649470-11661540 Glycine max
Glyma.15G142400 10.0kb downstream 10.0kb downstream 10000 false Chr15: 11651541-11661540 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315127 5265 Fabidae View MSA
124073556 5270 Rosid View MSA
123753144 5271 Pentapetalae View MSA
122796626 5272 Eudicot View MSA
122051222 5273 Angiosperm View MSA
121351779 5274 Embryophyte View MSA
123382322 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 567.219 0.0 2542.39 High High
cufflinks 1.22326 0.0 4.38357    
cufflinks 2.76666 0.0 9.14005    
cufflinks 0.72276 0.0 2.67248    
cufflinks 23.8476 0.0 63.6665 High  
cufflinks 506.329 0.0 2182.76 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.318671 0.0 1.22302   Low
cufflinks 86.8668 0.0 250.665 High  
cufflinks 1.01        
cufflinks 64.621     High High
cufflinks 1.23        
cufflinks 32.127     High High
cufflinks 15.502     High  
cufflinks 1.688        
cufflinks 1.111        
cufflinks 0.983        
cufflinks 0.296       Low
cufflinks 1.85        
cufflinks 2.437        
cufflinks 131.581     High High
cufflinks 2.59        
cufflinks 1.494        
cufflinks 110.901     High High
cufflinks 1.751        
cufflinks 25.073     High  

0 Strain