Gene : Glyma.15G139000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31221:SF13 - WRKY TRANSCRIPTION FACTOR 48-RELATED Genomic Order:  1390
Name:  ? Glyma.15G139000 Secondary Identifier:  ? PAC:30498806
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G139000 0.5kb upstream 0.5kb upstream 3353 true Chr15: 11314329-11317681 Glycine max
Glyma.15G139000 0.5kb upstream 0.5kb upstream 500 false Chr15: 11317182-11317681 Glycine max
Glyma.15G139000 0.5kb downstream 0.5kb downstream 3353 true Chr15: 11313829-11317181 Glycine max
Glyma.15G139000 0.5kb downstream 0.5kb downstream 500 false Chr15: 11313829-11314328 Glycine max
Glyma.15G139000 1.0kb upstream 1.0kb upstream 3853 true Chr15: 11314329-11318181 Glycine max
Glyma.15G139000 1.0kb upstream 1.0kb upstream 1000 false Chr15: 11317182-11318181 Glycine max
Glyma.15G139000 1.0kb downstream 1.0kb downstream 3853 true Chr15: 11313329-11317181 Glycine max
Glyma.15G139000 1.0kb downstream 1.0kb downstream 1000 false Chr15: 11313329-11314328 Glycine max
Glyma.15G139000 2.0kb upstream 2.0kb upstream 4853 true Chr15: 11314329-11319181 Glycine max
Glyma.15G139000 2.0kb upstream 2.0kb upstream 2000 false Chr15: 11317182-11319181 Glycine max
Glyma.15G139000 2.0kb downstream 2.0kb downstream 4853 true Chr15: 11312329-11317181 Glycine max
Glyma.15G139000 2.0kb downstream 2.0kb downstream 2000 false Chr15: 11312329-11314328 Glycine max
Glyma.15G139000 5.0kb upstream 5.0kb upstream 7853 true Chr15: 11314329-11322181 Glycine max
Glyma.15G139000 5.0kb upstream 5.0kb upstream 5000 false Chr15: 11317182-11322181 Glycine max
Glyma.15G139000 5.0kb downstream 5.0kb downstream 7853 true Chr15: 11309329-11317181 Glycine max
Glyma.15G139000 5.0kb downstream 5.0kb downstream 5000 false Chr15: 11309329-11314328 Glycine max
Glyma.15G139000 10.0kb upstream 10.0kb upstream 12853 true Chr15: 11314329-11327181 Glycine max
Glyma.15G139000 10.0kb upstream 10.0kb upstream 10000 false Chr15: 11317182-11327181 Glycine max
Glyma.15G139000 10.0kb downstream 10.0kb downstream 12853 true Chr15: 11304329-11317181 Glycine max
Glyma.15G139000 10.0kb downstream 10.0kb downstream 10000 false Chr15: 11304329-11314328 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311712 5265 Fabidae View MSA
124074051 5270 Rosid View MSA
123746347 5271 Pentapetalae View MSA
122795179 5272 Eudicot View MSA
122045566 5273 Angiosperm View MSA
121351214 5274 Embryophyte View MSA
123428268 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.55012 0.0 12.1267   High
cufflinks 2.04573 0.0 13.1006   High
cufflinks 0.25651 0.0 2.22641    
cufflinks 0.35555 0.0 3.05494    
cufflinks 0.310882 0.0 1.52181    
cufflinks 0.678453 0.0 4.13272    
cufflinks 0.0967257 0.0 0.385265 Low Low
cufflinks 0.966809 0.0 5.67369    
cufflinks 0.25466 0.0 1.82522 Low  
cufflinks 0.121        
cufflinks 0.253        
cufflinks 0.134        
cufflinks 0.002     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.169        
cufflinks 0.177        
cufflinks 0.478        
cufflinks 0.074     Low  
cufflinks 0.434        
cufflinks 0.095        
cufflinks 1.254       High
cufflinks 0.096        
cufflinks 0.321        
cufflinks 0.455        
cufflinks 0.154        
cufflinks 0.335        

0 Strain