Gene : Glyma.15G098300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR15117 - ATAXIN 7 RELATED Genomic Order:  983
Name:  ? Glyma.15G098300 Secondary Identifier:  ? PAC:30498263
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G098300 0.5kb upstream 0.5kb upstream 6925 true Chr15: 7644193-7651117 Glycine max
Glyma.15G098300 0.5kb upstream 0.5kb upstream 500 false Chr15: 7650618-7651117 Glycine max
Glyma.15G098300 0.5kb downstream 0.5kb downstream 6925 true Chr15: 7643693-7650617 Glycine max
Glyma.15G098300 0.5kb downstream 0.5kb downstream 500 false Chr15: 7643693-7644192 Glycine max
Glyma.15G098300 1.0kb upstream 1.0kb upstream 7425 true Chr15: 7644193-7651617 Glycine max
Glyma.15G098300 1.0kb upstream 1.0kb upstream 1000 false Chr15: 7650618-7651617 Glycine max
Glyma.15G098300 1.0kb downstream 1.0kb downstream 7425 true Chr15: 7643193-7650617 Glycine max
Glyma.15G098300 1.0kb downstream 1.0kb downstream 1000 false Chr15: 7643193-7644192 Glycine max
Glyma.15G098300 2.0kb upstream 2.0kb upstream 8425 true Chr15: 7644193-7652617 Glycine max
Glyma.15G098300 2.0kb upstream 2.0kb upstream 2000 false Chr15: 7650618-7652617 Glycine max
Glyma.15G098300 2.0kb downstream 2.0kb downstream 8425 true Chr15: 7642193-7650617 Glycine max
Glyma.15G098300 2.0kb downstream 2.0kb downstream 2000 false Chr15: 7642193-7644192 Glycine max
Glyma.15G098300 5.0kb upstream 5.0kb upstream 11425 true Chr15: 7644193-7655617 Glycine max
Glyma.15G098300 5.0kb upstream 5.0kb upstream 5000 false Chr15: 7650618-7655617 Glycine max
Glyma.15G098300 5.0kb downstream 5.0kb downstream 11425 true Chr15: 7639193-7650617 Glycine max
Glyma.15G098300 5.0kb downstream 5.0kb downstream 5000 false Chr15: 7639193-7644192 Glycine max
Glyma.15G098300 10.0kb upstream 10.0kb upstream 16425 true Chr15: 7644193-7660617 Glycine max
Glyma.15G098300 10.0kb upstream 10.0kb upstream 10000 false Chr15: 7650618-7660617 Glycine max
Glyma.15G098300 10.0kb downstream 10.0kb downstream 16425 true Chr15: 7634193-7650617 Glycine max
Glyma.15G098300 10.0kb downstream 10.0kb downstream 10000 false Chr15: 7634193-7644192 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305250 5265 Fabidae View MSA
124070054 5270 Rosid View MSA
123742737 5271 Pentapetalae View MSA
122795135 5272 Eudicot View MSA
122048179 5273 Angiosperm View MSA
121348263 5274 Embryophyte View MSA
123380797 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.65042 0.0 16.7235    
cufflinks 8.87605 0.0 32.034   High
cufflinks 5.61419 0.0 22.1509    
cufflinks 5.82033 0.0 23.0245    
cufflinks 3.08744 0.0 14.8425    
cufflinks 1.71305 0.0 8.40363   Low
cufflinks 5.75136 0.0 22.8139    
cufflinks 5.31382 0.0 22.2235    
cufflinks 3.70552 0.0 14.2562    
cufflinks 0.618        
cufflinks 0.098       Low
cufflinks 0.889        
cufflinks 0.285        
cufflinks 0.355        
cufflinks 0.253        
cufflinks 1.044        
cufflinks 0.182       Low
cufflinks 1.338       High
cufflinks 1.328       High
cufflinks 1.101        
cufflinks 0.193        
cufflinks 1.012        
cufflinks 1.162        
cufflinks 0.134       Low
cufflinks 1.245       High
cufflinks 0.196        

0 Strain