Gene : Glyma.15G116800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE Genomic Order:  1168
Name:  ? Glyma.15G116800 Secondary Identifier:  ? PAC:30499959
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G116800 0.5kb upstream 0.5kb upstream 3462 true Chr15: 9183326-9186787 Glycine max
Glyma.15G116800 0.5kb upstream 0.5kb upstream 500 false Chr15: 9183326-9183825 Glycine max
Glyma.15G116800 0.5kb downstream 0.5kb downstream 3462 true Chr15: 9183826-9187287 Glycine max
Glyma.15G116800 0.5kb downstream 0.5kb downstream 500 false Chr15: 9186788-9187287 Glycine max
Glyma.15G116800 1.0kb upstream 1.0kb upstream 3962 true Chr15: 9182826-9186787 Glycine max
Glyma.15G116800 1.0kb upstream 1.0kb upstream 1000 false Chr15: 9182826-9183825 Glycine max
Glyma.15G116800 1.0kb downstream 1.0kb downstream 3962 true Chr15: 9183826-9187787 Glycine max
Glyma.15G116800 1.0kb downstream 1.0kb downstream 1000 false Chr15: 9186788-9187787 Glycine max
Glyma.15G116800 2.0kb upstream 2.0kb upstream 4962 true Chr15: 9181826-9186787 Glycine max
Glyma.15G116800 2.0kb upstream 2.0kb upstream 2000 false Chr15: 9181826-9183825 Glycine max
Glyma.15G116800 2.0kb downstream 2.0kb downstream 4962 true Chr15: 9183826-9188787 Glycine max
Glyma.15G116800 2.0kb downstream 2.0kb downstream 2000 false Chr15: 9186788-9188787 Glycine max
Glyma.15G116800 5.0kb upstream 5.0kb upstream 7962 true Chr15: 9178826-9186787 Glycine max
Glyma.15G116800 5.0kb upstream 5.0kb upstream 5000 false Chr15: 9178826-9183825 Glycine max
Glyma.15G116800 5.0kb downstream 5.0kb downstream 7962 true Chr15: 9183826-9191787 Glycine max
Glyma.15G116800 5.0kb downstream 5.0kb downstream 5000 false Chr15: 9186788-9191787 Glycine max
Glyma.15G116800 10.0kb upstream 10.0kb upstream 12962 true Chr15: 9173826-9186787 Glycine max
Glyma.15G116800 10.0kb upstream 10.0kb upstream 10000 false Chr15: 9173826-9183825 Glycine max
Glyma.15G116800 10.0kb downstream 10.0kb downstream 12962 true Chr15: 9183826-9196787 Glycine max
Glyma.15G116800 10.0kb downstream 10.0kb downstream 10000 false Chr15: 9186788-9196787 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309568 5265 Fabidae View MSA
124074610 5270 Rosid View MSA
123751007 5271 Pentapetalae View MSA
122791219 5272 Eudicot View MSA
122049002 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.62435 0.0 13.8799    
cufflinks 4.54312 0.0 13.6602    
cufflinks 0.616679 0.0 2.27015   Low
cufflinks 1.53543 0.0 5.31144    
cufflinks 1.70831 0.0 5.86275    
cufflinks 4.57419 0.0 13.7115    
cufflinks 5.90979 0.0 17.1732    
cufflinks 5.69854 0.0 16.6189    
cufflinks 3.5437 0.0 11.0234    
cufflinks 0.195       Low
cufflinks 0.887        
cufflinks 0.624        
cufflinks 0.305        
cufflinks 0.427        
cufflinks 4.179        
cufflinks 6.499       High
cufflinks 0.068     Low Low
cufflinks 1.251        
cufflinks 2.691        
cufflinks 5.142       High
cufflinks 0.794        
cufflinks 4.675       High
cufflinks 4.905       High
cufflinks 1.5        
cufflinks 4.087        
cufflinks 0.174       Low

0 Strain