Gene : Glyma.15G084600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR23012//PTHR23012:SF76 - MEMBRANE ASSOCIATED RING FINGER Genomic Order:  846
Name:  ? Glyma.15G084600 Secondary Identifier:  ? PAC:30498721
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G084600 0.5kb upstream 0.5kb upstream 4177 true Chr15: 6493602-6497778 Glycine max
Glyma.15G084600 0.5kb upstream 0.5kb upstream 500 false Chr15: 6493602-6494101 Glycine max
Glyma.15G084600 0.5kb downstream 0.5kb downstream 4177 true Chr15: 6494102-6498278 Glycine max
Glyma.15G084600 0.5kb downstream 0.5kb downstream 500 false Chr15: 6497779-6498278 Glycine max
Glyma.15G084600 1.0kb upstream 1.0kb upstream 4677 true Chr15: 6493102-6497778 Glycine max
Glyma.15G084600 1.0kb upstream 1.0kb upstream 1000 false Chr15: 6493102-6494101 Glycine max
Glyma.15G084600 1.0kb downstream 1.0kb downstream 4677 true Chr15: 6494102-6498778 Glycine max
Glyma.15G084600 1.0kb downstream 1.0kb downstream 1000 false Chr15: 6497779-6498778 Glycine max
Glyma.15G084600 2.0kb upstream 2.0kb upstream 5677 true Chr15: 6492102-6497778 Glycine max
Glyma.15G084600 2.0kb upstream 2.0kb upstream 2000 false Chr15: 6492102-6494101 Glycine max
Glyma.15G084600 2.0kb downstream 2.0kb downstream 5677 true Chr15: 6494102-6499778 Glycine max
Glyma.15G084600 2.0kb downstream 2.0kb downstream 2000 false Chr15: 6497779-6499778 Glycine max
Glyma.15G084600 5.0kb upstream 5.0kb upstream 8677 true Chr15: 6489102-6497778 Glycine max
Glyma.15G084600 5.0kb upstream 5.0kb upstream 5000 false Chr15: 6489102-6494101 Glycine max
Glyma.15G084600 5.0kb downstream 5.0kb downstream 8677 true Chr15: 6494102-6502778 Glycine max
Glyma.15G084600 5.0kb downstream 5.0kb downstream 5000 false Chr15: 6497779-6502778 Glycine max
Glyma.15G084600 10.0kb upstream 10.0kb upstream 13677 true Chr15: 6484102-6497778 Glycine max
Glyma.15G084600 10.0kb upstream 10.0kb upstream 10000 false Chr15: 6484102-6494101 Glycine max
Glyma.15G084600 10.0kb downstream 10.0kb downstream 13677 true Chr15: 6494102-6507778 Glycine max
Glyma.15G084600 10.0kb downstream 10.0kb downstream 10000 false Chr15: 6497779-6507778 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311020 5265 Fabidae View MSA
124066216 5270 Rosid View MSA
123751020 5271 Pentapetalae View MSA
122797542 5272 Eudicot View MSA
122049642 5273 Angiosperm View MSA
121350652 5274 Embryophyte View MSA
123428027 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.8178 0.0 34.353   High
cufflinks 1.9871 0.0 6.50127    
cufflinks 3.95285 0.0 11.6538    
cufflinks 2.41859 0.0 7.68504    
cufflinks 2.11432 0.0 6.88144    
cufflinks 6.58133 0.0 18.3966    
cufflinks 4.65669 0.0 13.547    
cufflinks 2.18884 0.0 7.0701    
cufflinks 3.0027 0.0 9.2759    
cufflinks 1.365       Low
cufflinks 12.329     High High
cufflinks 1.982        
cufflinks 1.869        
cufflinks 1.676        
cufflinks 10.214     High High
cufflinks 3.651        
cufflinks 1.237       Low
cufflinks 2.331        
cufflinks 1.612        
cufflinks 2.583        
cufflinks 14.814     High High
cufflinks 3.35        
cufflinks 2.797        
cufflinks 9.714     High High
cufflinks 3.676        
cufflinks 6.828     High  

0 Strain