Gene : Glyma.15G080900 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR22835//PTHR22835:SF189 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN Genomic Order:  809
Name:  ? Glyma.15G080900 Secondary Identifier:  ? PAC:30499571
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G080900 0.5kb upstream 0.5kb upstream 4860 true Chr15: 6185408-6190267 Glycine max
Glyma.15G080900 0.5kb upstream 0.5kb upstream 500 false Chr15: 6185408-6185907 Glycine max
Glyma.15G080900 0.5kb downstream 0.5kb downstream 4860 true Chr15: 6185908-6190767 Glycine max
Glyma.15G080900 0.5kb downstream 0.5kb downstream 500 false Chr15: 6190268-6190767 Glycine max
Glyma.15G080900 1.0kb upstream 1.0kb upstream 5360 true Chr15: 6184908-6190267 Glycine max
Glyma.15G080900 1.0kb upstream 1.0kb upstream 1000 false Chr15: 6184908-6185907 Glycine max
Glyma.15G080900 1.0kb downstream 1.0kb downstream 5360 true Chr15: 6185908-6191267 Glycine max
Glyma.15G080900 1.0kb downstream 1.0kb downstream 1000 false Chr15: 6190268-6191267 Glycine max
Glyma.15G080900 2.0kb upstream 2.0kb upstream 6360 true Chr15: 6183908-6190267 Glycine max
Glyma.15G080900 2.0kb upstream 2.0kb upstream 2000 false Chr15: 6183908-6185907 Glycine max
Glyma.15G080900 2.0kb downstream 2.0kb downstream 6360 true Chr15: 6185908-6192267 Glycine max
Glyma.15G080900 2.0kb downstream 2.0kb downstream 2000 false Chr15: 6190268-6192267 Glycine max
Glyma.15G080900 5.0kb upstream 5.0kb upstream 9360 true Chr15: 6180908-6190267 Glycine max
Glyma.15G080900 5.0kb upstream 5.0kb upstream 5000 false Chr15: 6180908-6185907 Glycine max
Glyma.15G080900 5.0kb downstream 5.0kb downstream 9360 true Chr15: 6185908-6195267 Glycine max
Glyma.15G080900 5.0kb downstream 5.0kb downstream 5000 false Chr15: 6190268-6195267 Glycine max
Glyma.15G080900 10.0kb upstream 10.0kb upstream 14360 true Chr15: 6175908-6190267 Glycine max
Glyma.15G080900 10.0kb upstream 10.0kb upstream 10000 false Chr15: 6175908-6185907 Glycine max
Glyma.15G080900 10.0kb downstream 10.0kb downstream 14360 true Chr15: 6185908-6200267 Glycine max
Glyma.15G080900 10.0kb downstream 10.0kb downstream 10000 false Chr15: 6190268-6200267 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313512 5265 Fabidae View MSA
124068482 5270 Rosid View MSA
123752448 5271 Pentapetalae View MSA
122797509 5272 Eudicot View MSA
122051674 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.44894 0.0 12.3544    
cufflinks 6.48484 0.0 24.0185   High
cufflinks 2.72873 0.0 9.87075    
cufflinks 4.0573 0.0 18.176    
cufflinks 0.601428 0.0 2.94407   Low
cufflinks 0.591278 0.0 2.87552   Low
cufflinks 0.453557 0.0 2.23592   Low
cufflinks 3.17401 0.0 14.8442    
cufflinks 1.21515 0.0 5.40809    
cufflinks 0.734        
cufflinks 0.023     Low Low
cufflinks 0.475        
cufflinks 0.097        
cufflinks 0.009     Low Low
cufflinks 0.031     Low Low
cufflinks 0.841        
cufflinks 0.167        
cufflinks 0.31        
cufflinks 1.826       High
cufflinks 0.753        
cufflinks 0.028     Low Low
cufflinks 0.623        
cufflinks 0.974        
cufflinks 0.075        
cufflinks 0.775        
cufflinks 0.215        

0 Strain