Gene : Glyma.15G087500 G. max Wm82.a2.v1
Defline:  (1 of 74) KOG4412 - 26S proteasome regulatory complex, subunit PSMD10 Genomic Order:  875
Name:  ? Glyma.15G087500 Secondary Identifier:  ? PAC:30497031
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G087500 0.5kb upstream 0.5kb upstream 5167 true Chr15: 6734673-6739839 Glycine max
Glyma.15G087500 0.5kb upstream 0.5kb upstream 500 false Chr15: 6734673-6735172 Glycine max
Glyma.15G087500 0.5kb downstream 0.5kb downstream 5167 true Chr15: 6735173-6740339 Glycine max
Glyma.15G087500 0.5kb downstream 0.5kb downstream 500 false Chr15: 6739840-6740339 Glycine max
Glyma.15G087500 1.0kb upstream 1.0kb upstream 5667 true Chr15: 6734173-6739839 Glycine max
Glyma.15G087500 1.0kb upstream 1.0kb upstream 1000 false Chr15: 6734173-6735172 Glycine max
Glyma.15G087500 1.0kb downstream 1.0kb downstream 5667 true Chr15: 6735173-6740839 Glycine max
Glyma.15G087500 1.0kb downstream 1.0kb downstream 1000 false Chr15: 6739840-6740839 Glycine max
Glyma.15G087500 2.0kb upstream 2.0kb upstream 6667 true Chr15: 6733173-6739839 Glycine max
Glyma.15G087500 2.0kb upstream 2.0kb upstream 2000 false Chr15: 6733173-6735172 Glycine max
Glyma.15G087500 2.0kb downstream 2.0kb downstream 6667 true Chr15: 6735173-6741839 Glycine max
Glyma.15G087500 2.0kb downstream 2.0kb downstream 2000 false Chr15: 6739840-6741839 Glycine max
Glyma.15G087500 5.0kb upstream 5.0kb upstream 9667 true Chr15: 6730173-6739839 Glycine max
Glyma.15G087500 5.0kb upstream 5.0kb upstream 5000 false Chr15: 6730173-6735172 Glycine max
Glyma.15G087500 5.0kb downstream 5.0kb downstream 9667 true Chr15: 6735173-6744839 Glycine max
Glyma.15G087500 5.0kb downstream 5.0kb downstream 5000 false Chr15: 6739840-6744839 Glycine max
Glyma.15G087500 10.0kb upstream 10.0kb upstream 14667 true Chr15: 6725173-6739839 Glycine max
Glyma.15G087500 10.0kb upstream 10.0kb upstream 10000 false Chr15: 6725173-6735172 Glycine max
Glyma.15G087500 10.0kb downstream 10.0kb downstream 14667 true Chr15: 6735173-6749839 Glycine max
Glyma.15G087500 10.0kb downstream 10.0kb downstream 10000 false Chr15: 6739840-6749839 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298826 5265 Fabidae View MSA
124074259 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.00840889 0.0 0.0380294 Low Low
cufflinks 0.098162 0.0 0.383592 Low  
cufflinks 0.0319046 0.0 0.130307 Low  
cufflinks 0.149541 0.0 0.573776 Low  
cufflinks 0.106095 0.0 0.413175 Low  
cufflinks 0.0310085 0.0 0.126779 Low  
cufflinks 0.00743201 0.0 0.0340401 Low Low
cufflinks 0.305252 0.0 1.13401   High
cufflinks 0.318048 0.0 1.17956   High
cufflinks 0.704       High
cufflinks 0.053     Low  
cufflinks 0.087     Low  
cufflinks 0.15        
cufflinks 0.017     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.14        
cufflinks 0.109        
cufflinks 0.217        
cufflinks 0.028     Low Low
cufflinks 0.124        
cufflinks 0.084        
cufflinks 0.221        
cufflinks 0.083     Low  
cufflinks 0.032     Low Low
cufflinks 0.128        
cufflinks 0.132        

0 Strain