Gene : Glyma.15G062400 G. max Wm82.a2.v1
Defline:  (1 of 12) PTHR10334//PTHR10334:SF231 - CYSTEINE-RICH SECRETORY PROTEIN-RELATED Genomic Order:  624
Name:  ? Glyma.15G062400 Secondary Identifier:  ? PAC:30498304
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G062400 0.5kb upstream 0.5kb upstream 1407 true Chr15: 4800088-4801494 Glycine max
Glyma.15G062400 0.5kb upstream 0.5kb upstream 500 false Chr15: 4800088-4800587 Glycine max
Glyma.15G062400 0.5kb downstream 0.5kb downstream 1407 true Chr15: 4800588-4801994 Glycine max
Glyma.15G062400 0.5kb downstream 0.5kb downstream 500 false Chr15: 4801495-4801994 Glycine max
Glyma.15G062400 1.0kb upstream 1.0kb upstream 1907 true Chr15: 4799588-4801494 Glycine max
Glyma.15G062400 1.0kb upstream 1.0kb upstream 1000 false Chr15: 4799588-4800587 Glycine max
Glyma.15G062400 1.0kb downstream 1.0kb downstream 1907 true Chr15: 4800588-4802494 Glycine max
Glyma.15G062400 1.0kb downstream 1.0kb downstream 1000 false Chr15: 4801495-4802494 Glycine max
Glyma.15G062400 2.0kb upstream 2.0kb upstream 2907 true Chr15: 4798588-4801494 Glycine max
Glyma.15G062400 2.0kb upstream 2.0kb upstream 2000 false Chr15: 4798588-4800587 Glycine max
Glyma.15G062400 2.0kb downstream 2.0kb downstream 2907 true Chr15: 4800588-4803494 Glycine max
Glyma.15G062400 2.0kb downstream 2.0kb downstream 2000 false Chr15: 4801495-4803494 Glycine max
Glyma.15G062400 5.0kb upstream 5.0kb upstream 5907 true Chr15: 4795588-4801494 Glycine max
Glyma.15G062400 5.0kb upstream 5.0kb upstream 5000 false Chr15: 4795588-4800587 Glycine max
Glyma.15G062400 5.0kb downstream 5.0kb downstream 5907 true Chr15: 4800588-4806494 Glycine max
Glyma.15G062400 5.0kb downstream 5.0kb downstream 5000 false Chr15: 4801495-4806494 Glycine max
Glyma.15G062400 10.0kb upstream 10.0kb upstream 10907 true Chr15: 4790588-4801494 Glycine max
Glyma.15G062400 10.0kb upstream 10.0kb upstream 10000 false Chr15: 4790588-4800587 Glycine max
Glyma.15G062400 10.0kb downstream 10.0kb downstream 10907 true Chr15: 4800588-4811494 Glycine max
Glyma.15G062400 10.0kb downstream 10.0kb downstream 10000 false Chr15: 4801495-4811494 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310532 5265 Fabidae View MSA
124074687 5270 Rosid View MSA
123753358 5271 Pentapetalae View MSA
122790752 5272 Eudicot View MSA
122051477 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121350274 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.4972 0.0 33.6493    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 38.7033 0.0 103.32 High  
cufflinks 6.17062 0.0 19.6959    
cufflinks 13.9003 0.0 39.76    
cufflinks 801.436 0.0 3383.29 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.0607 0.0 3.95123   Low
cufflinks 27.1377 0.0 73.274 High  
cufflinks 0.2        
cufflinks 11.525     High  
cufflinks 22.76     High High
cufflinks 23.223     High High
cufflinks 12.161     High  
cufflinks 6.329     High  
cufflinks 0.021     Low Low
cufflinks 2.349        
cufflinks 1.009        
cufflinks 0.73        
cufflinks 0.019     Low Low
cufflinks 2.529        
cufflinks 0.154        
cufflinks 0.387        
cufflinks 43.733     High High
cufflinks 0.021     Low Low
cufflinks 8.003     High  

0 Strain