Gene : Glyma.15G005900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23205 - SPLICING FACTOR 3A SUBUNIT 2 Genomic Order:  59
Name:  ? Glyma.15G005900 Secondary Identifier:  ? PAC:30496386
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G005900 0.5kb upstream 0.5kb upstream 2765 true Chr15: 503403-506167 Glycine max
Glyma.15G005900 0.5kb upstream 0.5kb upstream 500 false Chr15: 503403-503902 Glycine max
Glyma.15G005900 0.5kb downstream 0.5kb downstream 2765 true Chr15: 503903-506667 Glycine max
Glyma.15G005900 0.5kb downstream 0.5kb downstream 500 false Chr15: 506168-506667 Glycine max
Glyma.15G005900 1.0kb upstream 1.0kb upstream 3265 true Chr15: 502903-506167 Glycine max
Glyma.15G005900 1.0kb upstream 1.0kb upstream 1000 false Chr15: 502903-503902 Glycine max
Glyma.15G005900 1.0kb downstream 1.0kb downstream 3265 true Chr15: 503903-507167 Glycine max
Glyma.15G005900 1.0kb downstream 1.0kb downstream 1000 false Chr15: 506168-507167 Glycine max
Glyma.15G005900 2.0kb upstream 2.0kb upstream 4265 true Chr15: 501903-506167 Glycine max
Glyma.15G005900 2.0kb upstream 2.0kb upstream 2000 false Chr15: 501903-503902 Glycine max
Glyma.15G005900 2.0kb downstream 2.0kb downstream 4265 true Chr15: 503903-508167 Glycine max
Glyma.15G005900 2.0kb downstream 2.0kb downstream 2000 false Chr15: 506168-508167 Glycine max
Glyma.15G005900 5.0kb upstream 5.0kb upstream 7265 true Chr15: 498903-506167 Glycine max
Glyma.15G005900 5.0kb upstream 5.0kb upstream 5000 false Chr15: 498903-503902 Glycine max
Glyma.15G005900 5.0kb downstream 5.0kb downstream 7265 true Chr15: 503903-511167 Glycine max
Glyma.15G005900 5.0kb downstream 5.0kb downstream 5000 false Chr15: 506168-511167 Glycine max
Glyma.15G005900 10.0kb upstream 10.0kb upstream 12265 true Chr15: 493903-506167 Glycine max
Glyma.15G005900 10.0kb upstream 10.0kb upstream 10000 false Chr15: 493903-503902 Glycine max
Glyma.15G005900 10.0kb downstream 10.0kb downstream 12265 true Chr15: 503903-516167 Glycine max
Glyma.15G005900 10.0kb downstream 10.0kb downstream 10000 false Chr15: 506168-516167 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300303 5265 Fabidae View MSA
124064225 5270 Rosid View MSA
123745899 5271 Pentapetalae View MSA
122793816 5272 Eudicot View MSA
122043873 5273 Angiosperm View MSA
121344235 5274 Embryophyte View MSA
123425065 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.654 0.0 73.8693 High  
cufflinks 16.3842 0.0 44.0647    
cufflinks 24.3949 0.0 65.0875 High  
cufflinks 22.5341 0.0 60.1308 High  
cufflinks 27.3243 0.0 73.038 High  
cufflinks 12.6743 0.0 34.4515   Low
cufflinks 23.3763 0.0 62.3664 High  
cufflinks 29.1699 0.0 78.0033 High High
cufflinks 16.976 0.0 45.5366    
cufflinks 7.841     High  
cufflinks 4.418       Low
cufflinks 6.578        
cufflinks 9.005     High  
cufflinks 12.38     High High
cufflinks 4.724       Low
cufflinks 7.854     High  
cufflinks 5.37        
cufflinks 6.274        
cufflinks 9.747     High High
cufflinks 7.477     High  
cufflinks 5.838     High  
cufflinks 6.905        
cufflinks 9.303     High High
cufflinks 5.894        
cufflinks 7.009     High  
cufflinks 5.501        

0 Strain