Gene : Glyma.15G004900 G. max Wm82.a2.v1
Defline:  (1 of 74) KOG1947 - Leucine rich repeat proteins, some proteins contain F-box Genomic Order:  49
Name:  ? Glyma.15G004900 Secondary Identifier:  ? PAC:30499652
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G004900 0.5kb upstream 0.5kb upstream 3334 true Chr15: 431912-435245 Glycine max
Glyma.15G004900 0.5kb upstream 0.5kb upstream 500 false Chr15: 434746-435245 Glycine max
Glyma.15G004900 0.5kb downstream 0.5kb downstream 3334 true Chr15: 431412-434745 Glycine max
Glyma.15G004900 0.5kb downstream 0.5kb downstream 500 false Chr15: 431412-431911 Glycine max
Glyma.15G004900 1.0kb upstream 1.0kb upstream 3834 true Chr15: 431912-435745 Glycine max
Glyma.15G004900 1.0kb upstream 1.0kb upstream 1000 false Chr15: 434746-435745 Glycine max
Glyma.15G004900 1.0kb downstream 1.0kb downstream 3834 true Chr15: 430912-434745 Glycine max
Glyma.15G004900 1.0kb downstream 1.0kb downstream 1000 false Chr15: 430912-431911 Glycine max
Glyma.15G004900 2.0kb upstream 2.0kb upstream 4834 true Chr15: 431912-436745 Glycine max
Glyma.15G004900 2.0kb upstream 2.0kb upstream 2000 false Chr15: 434746-436745 Glycine max
Glyma.15G004900 2.0kb downstream 2.0kb downstream 4834 true Chr15: 429912-434745 Glycine max
Glyma.15G004900 2.0kb downstream 2.0kb downstream 2000 false Chr15: 429912-431911 Glycine max
Glyma.15G004900 5.0kb upstream 5.0kb upstream 7834 true Chr15: 431912-439745 Glycine max
Glyma.15G004900 5.0kb upstream 5.0kb upstream 5000 false Chr15: 434746-439745 Glycine max
Glyma.15G004900 5.0kb downstream 5.0kb downstream 7834 true Chr15: 426912-434745 Glycine max
Glyma.15G004900 5.0kb downstream 5.0kb downstream 5000 false Chr15: 426912-431911 Glycine max
Glyma.15G004900 10.0kb upstream 10.0kb upstream 12834 true Chr15: 431912-444745 Glycine max
Glyma.15G004900 10.0kb upstream 10.0kb upstream 10000 false Chr15: 434746-444745 Glycine max
Glyma.15G004900 10.0kb downstream 10.0kb downstream 12834 true Chr15: 421912-434745 Glycine max
Glyma.15G004900 10.0kb downstream 10.0kb downstream 10000 false Chr15: 421912-431911 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302890 5265 Fabidae View MSA
124064458 5270 Rosid View MSA
123737042 5271 Pentapetalae View MSA
122791043 5272 Eudicot View MSA
122044000 5273 Angiosperm View MSA
121347064 5274 Embryophyte View MSA
123380487 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.18628 0.0 33.945   High
cufflinks 3.78832 0.0 17.8242    
cufflinks 6.15165 0.0 30.4771    
cufflinks 3.5661 0.0 19.0566    
cufflinks 3.07576 0.0 16.587    
cufflinks 6.28782 0.0 24.3743    
cufflinks 2.53898 0.0 13.4444   Low
cufflinks 6.50527 0.0 25.5494    
cufflinks 3.24466 0.0 13.673    
cufflinks 0.966        
cufflinks 1.776       High
cufflinks 1.276        
cufflinks 0.682       Low
cufflinks 0.67       Low
cufflinks 0.906        
cufflinks 1.356        
cufflinks 0.812        
cufflinks 1.214        
cufflinks 0.656       Low
cufflinks 1.917       High
cufflinks 1.31        
cufflinks 1.594        
cufflinks 1.247        
cufflinks 1.451        
cufflinks 1.605       High
cufflinks 0.856        

0 Strain