Gene : Glyma.14G210200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13040 - AUTOPHAGY PROTEIN 5 Genomic Order:  2102
Name:  ? Glyma.14G210200 Secondary Identifier:  ? PAC:30533794
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G210200 0.5kb upstream 0.5kb upstream 10502 true Chr14: 47535839-47546340 Glycine max
Glyma.14G210200 0.5kb upstream 0.5kb upstream 500 false Chr14: 47545841-47546340 Glycine max
Glyma.14G210200 0.5kb downstream 0.5kb downstream 10502 true Chr14: 47535339-47545840 Glycine max
Glyma.14G210200 0.5kb downstream 0.5kb downstream 500 false Chr14: 47535339-47535838 Glycine max
Glyma.14G210200 1.0kb upstream 1.0kb upstream 11002 true Chr14: 47535839-47546840 Glycine max
Glyma.14G210200 1.0kb upstream 1.0kb upstream 1000 false Chr14: 47545841-47546840 Glycine max
Glyma.14G210200 1.0kb downstream 1.0kb downstream 11002 true Chr14: 47534839-47545840 Glycine max
Glyma.14G210200 1.0kb downstream 1.0kb downstream 1000 false Chr14: 47534839-47535838 Glycine max
Glyma.14G210200 2.0kb upstream 2.0kb upstream 12002 true Chr14: 47535839-47547840 Glycine max
Glyma.14G210200 2.0kb upstream 2.0kb upstream 2000 false Chr14: 47545841-47547840 Glycine max
Glyma.14G210200 2.0kb downstream 2.0kb downstream 12002 true Chr14: 47533839-47545840 Glycine max
Glyma.14G210200 2.0kb downstream 2.0kb downstream 2000 false Chr14: 47533839-47535838 Glycine max
Glyma.14G210200 5.0kb upstream 5.0kb upstream 15002 true Chr14: 47535839-47550840 Glycine max
Glyma.14G210200 5.0kb upstream 5.0kb upstream 5000 false Chr14: 47545841-47550840 Glycine max
Glyma.14G210200 5.0kb downstream 5.0kb downstream 15002 true Chr14: 47530839-47545840 Glycine max
Glyma.14G210200 5.0kb downstream 5.0kb downstream 5000 false Chr14: 47530839-47535838 Glycine max
Glyma.14G210200 10.0kb upstream 10.0kb upstream 20002 true Chr14: 47535839-47555840 Glycine max
Glyma.14G210200 10.0kb upstream 10.0kb upstream 10000 false Chr14: 47545841-47555840 Glycine max
Glyma.14G210200 10.0kb downstream 10.0kb downstream 20002 true Chr14: 47525839-47545840 Glycine max
Glyma.14G210200 10.0kb downstream 10.0kb downstream 10000 false Chr14: 47525839-47535838 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300915 5265 Fabidae View MSA
124066677 5270 Rosid View MSA
123746319 5271 Pentapetalae View MSA
122787337 5272 Eudicot View MSA
122043492 5273 Angiosperm View MSA
121349357 5274 Embryophyte View MSA
123424338 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.29649 0.0 18.0079    
cufflinks 4.0289 0.0 19.9898    
cufflinks 5.82158 0.0 28.9483    
cufflinks 3.40441 0.0 20.6383   Low
cufflinks 3.98088 0.0 23.005    
cufflinks 7.94776 0.0 42.0903   High
cufflinks 4.01565 0.0 20.1728    
cufflinks 4.99773 0.0 23.2629    
cufflinks 3.68699 0.0 22.4987    
cufflinks 0.129        
cufflinks 0.107       Low
cufflinks 0.153        
cufflinks 0.126        
cufflinks 0.11       Low
cufflinks 0.129        
cufflinks 0.171       High
cufflinks 0.091       Low
cufflinks 0.149        
cufflinks 0.142        
cufflinks 0.161       High
cufflinks 0.12        
cufflinks 0.174       High
cufflinks 0.136        
cufflinks 0.123        
cufflinks 0.158        
cufflinks 0.124        

0 Strain