Gene : Glyma.14G171800 G. max Wm82.a2.v1
Defline:  (1 of 1) PF00085//PF00515//PF07719//PF13414 - Thioredoxin (Thioredoxin) // Tetratricopeptide repeat (TPR_1) // Tetratricopeptide repeat (TPR_2) // TPR repeat (TPR_11) Genomic Order:  1718
Name:  ? Glyma.14G171800 Secondary Identifier:  ? PAC:30535130
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G171800 0.5kb upstream 0.5kb upstream 4205 true Chr14: 42567223-42571427 Glycine max
Glyma.14G171800 0.5kb upstream 0.5kb upstream 500 false Chr14: 42570928-42571427 Glycine max
Glyma.14G171800 0.5kb downstream 0.5kb downstream 4205 true Chr14: 42566723-42570927 Glycine max
Glyma.14G171800 0.5kb downstream 0.5kb downstream 500 false Chr14: 42566723-42567222 Glycine max
Glyma.14G171800 1.0kb upstream 1.0kb upstream 4705 true Chr14: 42567223-42571927 Glycine max
Glyma.14G171800 1.0kb upstream 1.0kb upstream 1000 false Chr14: 42570928-42571927 Glycine max
Glyma.14G171800 1.0kb downstream 1.0kb downstream 4705 true Chr14: 42566223-42570927 Glycine max
Glyma.14G171800 1.0kb downstream 1.0kb downstream 1000 false Chr14: 42566223-42567222 Glycine max
Glyma.14G171800 2.0kb upstream 2.0kb upstream 5705 true Chr14: 42567223-42572927 Glycine max
Glyma.14G171800 2.0kb upstream 2.0kb upstream 2000 false Chr14: 42570928-42572927 Glycine max
Glyma.14G171800 2.0kb downstream 2.0kb downstream 5705 true Chr14: 42565223-42570927 Glycine max
Glyma.14G171800 2.0kb downstream 2.0kb downstream 2000 false Chr14: 42565223-42567222 Glycine max
Glyma.14G171800 5.0kb upstream 5.0kb upstream 8705 true Chr14: 42567223-42575927 Glycine max
Glyma.14G171800 5.0kb upstream 5.0kb upstream 5000 false Chr14: 42570928-42575927 Glycine max
Glyma.14G171800 5.0kb downstream 5.0kb downstream 8705 true Chr14: 42562223-42570927 Glycine max
Glyma.14G171800 5.0kb downstream 5.0kb downstream 5000 false Chr14: 42562223-42567222 Glycine max
Glyma.14G171800 10.0kb upstream 10.0kb upstream 13705 true Chr14: 42567223-42580927 Glycine max
Glyma.14G171800 10.0kb upstream 10.0kb upstream 10000 false Chr14: 42570928-42580927 Glycine max
Glyma.14G171800 10.0kb downstream 10.0kb downstream 13705 true Chr14: 42557223-42570927 Glycine max
Glyma.14G171800 10.0kb downstream 10.0kb downstream 10000 false Chr14: 42557223-42567222 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311538 5265 Fabidae View MSA
124069860 5270 Rosid View MSA
123742749 5271 Pentapetalae View MSA
122798057 5272 Eudicot View MSA
122047040 5273 Angiosperm View MSA
121310683 5274 Embryophyte View MSA
123348108 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0934015 0.0 0.3636 Low  
cufflinks 0.179186 0.0 0.901912 Low  
cufflinks 0.13601 0.0 0.66798 Low  
cufflinks 0.370134 0.0 2.23295    
cufflinks 4.95109 0.0 17.979    
cufflinks 24.6084 0.0 90.6961 High High
cufflinks 0.00687361 0.0 0.036844 Low Low
cufflinks 8.36181 0.0 28.3962    
cufflinks 5.57046 0.0 20.2763    
cufflinks 7.371       High
cufflinks 3.083        
cufflinks 0.311        
cufflinks 14.635     High High
cufflinks 2.376        
cufflinks 0.501        
cufflinks 0.355        
cufflinks 9.807     High High
cufflinks 0.206       Low
cufflinks 0.14       Low
cufflinks 0.269        
cufflinks 2.508        
cufflinks 0.273        
cufflinks 0.367        
cufflinks 1.556        
cufflinks 0.31        
cufflinks 14.659     High High

0 Strain