Gene : Glyma.14G124900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR23076:SF40 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 11, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  1249
Name:  ? Glyma.14G124900 Secondary Identifier:  ? PAC:30532291
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G124900 0.5kb upstream 0.5kb upstream 30447 true Chr14: 19558088-19588534 Glycine max
Glyma.14G124900 0.5kb upstream 0.5kb upstream 500 false Chr14: 19558088-19558587 Glycine max
Glyma.14G124900 0.5kb downstream 0.5kb downstream 30447 true Chr14: 19558588-19589034 Glycine max
Glyma.14G124900 0.5kb downstream 0.5kb downstream 500 false Chr14: 19588535-19589034 Glycine max
Glyma.14G124900 1.0kb upstream 1.0kb upstream 30947 true Chr14: 19557588-19588534 Glycine max
Glyma.14G124900 1.0kb upstream 1.0kb upstream 1000 false Chr14: 19557588-19558587 Glycine max
Glyma.14G124900 1.0kb downstream 1.0kb downstream 30947 true Chr14: 19558588-19589534 Glycine max
Glyma.14G124900 1.0kb downstream 1.0kb downstream 1000 false Chr14: 19588535-19589534 Glycine max
Glyma.14G124900 2.0kb upstream 2.0kb upstream 31947 true Chr14: 19556588-19588534 Glycine max
Glyma.14G124900 2.0kb upstream 2.0kb upstream 2000 false Chr14: 19556588-19558587 Glycine max
Glyma.14G124900 2.0kb downstream 2.0kb downstream 31947 true Chr14: 19558588-19590534 Glycine max
Glyma.14G124900 2.0kb downstream 2.0kb downstream 2000 false Chr14: 19588535-19590534 Glycine max
Glyma.14G124900 5.0kb upstream 5.0kb upstream 34947 true Chr14: 19553588-19588534 Glycine max
Glyma.14G124900 5.0kb upstream 5.0kb upstream 5000 false Chr14: 19553588-19558587 Glycine max
Glyma.14G124900 5.0kb downstream 5.0kb downstream 34947 true Chr14: 19558588-19593534 Glycine max
Glyma.14G124900 5.0kb downstream 5.0kb downstream 5000 false Chr14: 19588535-19593534 Glycine max
Glyma.14G124900 10.0kb upstream 10.0kb upstream 39947 true Chr14: 19548588-19588534 Glycine max
Glyma.14G124900 10.0kb upstream 10.0kb upstream 10000 false Chr14: 19548588-19558587 Glycine max
Glyma.14G124900 10.0kb downstream 10.0kb downstream 39947 true Chr14: 19558588-19598534 Glycine max
Glyma.14G124900 10.0kb downstream 10.0kb downstream 10000 false Chr14: 19588535-19598534 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299271 5265 Fabidae View MSA
124073797 5270 Rosid View MSA
123744222 5271 Pentapetalae View MSA
122793624 5272 Eudicot View MSA
122043793 5273 Angiosperm View MSA
121346284 5274 Embryophyte View MSA
123428638 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.38591 0.0 19.0329    
cufflinks 5.81586 0.0 20.3799    
cufflinks 5.71385 0.0 20.1323    
cufflinks 5.33632 0.0 18.9486    
cufflinks 5.05286 0.0 18.1884    
cufflinks 2.79887 0.0 11.2897   Low
cufflinks 6.53471 0.0 22.6489   High
cufflinks 4.7745 0.0 14.7522    
cufflinks 4.23834 0.0 15.5881    
cufflinks 0.245        
cufflinks 0.114       Low
cufflinks 0.362        
cufflinks 0.229        
cufflinks 0.265        
cufflinks 0.159        
cufflinks 0.571       High
cufflinks 0.155        
cufflinks 0.337        
cufflinks 0.383        
cufflinks 0.548       High
cufflinks 0.113       Low
cufflinks 0.55       High
cufflinks 0.545       High
cufflinks 0.129       Low
cufflinks 0.519       High
cufflinks 0.176        

0 Strain