Gene : Glyma.14G054100 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR22950//PTHR22950:SF323 - AMINO ACID TRANSPORTER Genomic Order:  541
Name:  ? Glyma.14G054100 Secondary Identifier:  ? PAC:30533867
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G054100 0.5kb upstream 0.5kb upstream 3334 true Chr14: 4278598-4281931 Glycine max
Glyma.14G054100 0.5kb upstream 0.5kb upstream 500 false Chr14: 4281432-4281931 Glycine max
Glyma.14G054100 0.5kb downstream 0.5kb downstream 3334 true Chr14: 4278098-4281431 Glycine max
Glyma.14G054100 0.5kb downstream 0.5kb downstream 500 false Chr14: 4278098-4278597 Glycine max
Glyma.14G054100 1.0kb upstream 1.0kb upstream 3834 true Chr14: 4278598-4282431 Glycine max
Glyma.14G054100 1.0kb upstream 1.0kb upstream 1000 false Chr14: 4281432-4282431 Glycine max
Glyma.14G054100 1.0kb downstream 1.0kb downstream 3834 true Chr14: 4277598-4281431 Glycine max
Glyma.14G054100 1.0kb downstream 1.0kb downstream 1000 false Chr14: 4277598-4278597 Glycine max
Glyma.14G054100 2.0kb upstream 2.0kb upstream 4834 true Chr14: 4278598-4283431 Glycine max
Glyma.14G054100 2.0kb upstream 2.0kb upstream 2000 false Chr14: 4281432-4283431 Glycine max
Glyma.14G054100 2.0kb downstream 2.0kb downstream 4834 true Chr14: 4276598-4281431 Glycine max
Glyma.14G054100 2.0kb downstream 2.0kb downstream 2000 false Chr14: 4276598-4278597 Glycine max
Glyma.14G054100 5.0kb upstream 5.0kb upstream 7834 true Chr14: 4278598-4286431 Glycine max
Glyma.14G054100 5.0kb upstream 5.0kb upstream 5000 false Chr14: 4281432-4286431 Glycine max
Glyma.14G054100 5.0kb downstream 5.0kb downstream 7834 true Chr14: 4273598-4281431 Glycine max
Glyma.14G054100 5.0kb downstream 5.0kb downstream 5000 false Chr14: 4273598-4278597 Glycine max
Glyma.14G054100 10.0kb upstream 10.0kb upstream 12834 true Chr14: 4278598-4291431 Glycine max
Glyma.14G054100 10.0kb upstream 10.0kb upstream 10000 false Chr14: 4281432-4291431 Glycine max
Glyma.14G054100 10.0kb downstream 10.0kb downstream 12834 true Chr14: 4268598-4281431 Glycine max
Glyma.14G054100 10.0kb downstream 10.0kb downstream 10000 false Chr14: 4268598-4278597 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311499 5265 Fabidae View MSA
124061785 5270 Rosid View MSA
123738640 5271 Pentapetalae View MSA
122795353 5272 Eudicot View MSA
122048665 5273 Angiosperm View MSA
121311064 5274 Embryophyte View MSA
123428317 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.6659 0.0 21.5544    
cufflinks 3.49879 0.0 10.8959    
cufflinks 3.68098 0.0 11.3612    
cufflinks 5.08545 0.0 15.0047    
cufflinks 13.9996 0.0 37.6634   High
cufflinks 10.8099 0.0 29.4771    
cufflinks 2.84292 0.0 9.10537   Low
cufflinks 14.9301 0.0 40.0917   High
cufflinks 4.85523 0.0 14.4095    
cufflinks 6.654       High
cufflinks 2.49        
cufflinks 5.626       High
cufflinks 3.512        
cufflinks 2.794        
cufflinks 4.251       High
cufflinks 2.24        
cufflinks 1.365       Low
cufflinks 5.809       High
cufflinks 1.607        
cufflinks 1.088       Low
cufflinks 2.225        
cufflinks 1.329       Low
cufflinks 1.819        
cufflinks 1.733        
cufflinks 2.16        
cufflinks 1.458        

0 Strain