Gene : Glyma.14G030000 G. max Wm82.a2.v1
Defline:  (1 of 1) PF00026//PF01775 - Eukaryotic aspartyl protease (Asp) // Ribosomal L18ae/LX protein domain (Ribosomal_L18ae) Genomic Order:  300
Name:  ? Glyma.14G030000 Secondary Identifier:  ? PAC:30533622
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G030000 0.5kb upstream 0.5kb upstream 6906 true Chr14: 2169235-2176140 Glycine max
Glyma.14G030000 0.5kb upstream 0.5kb upstream 500 false Chr14: 2175641-2176140 Glycine max
Glyma.14G030000 0.5kb downstream 0.5kb downstream 6906 true Chr14: 2168735-2175640 Glycine max
Glyma.14G030000 0.5kb downstream 0.5kb downstream 500 false Chr14: 2168735-2169234 Glycine max
Glyma.14G030000 1.0kb upstream 1.0kb upstream 7406 true Chr14: 2169235-2176640 Glycine max
Glyma.14G030000 1.0kb upstream 1.0kb upstream 1000 false Chr14: 2175641-2176640 Glycine max
Glyma.14G030000 1.0kb downstream 1.0kb downstream 7406 true Chr14: 2168235-2175640 Glycine max
Glyma.14G030000 1.0kb downstream 1.0kb downstream 1000 false Chr14: 2168235-2169234 Glycine max
Glyma.14G030000 2.0kb upstream 2.0kb upstream 8406 true Chr14: 2169235-2177640 Glycine max
Glyma.14G030000 2.0kb upstream 2.0kb upstream 2000 false Chr14: 2175641-2177640 Glycine max
Glyma.14G030000 2.0kb downstream 2.0kb downstream 8406 true Chr14: 2167235-2175640 Glycine max
Glyma.14G030000 2.0kb downstream 2.0kb downstream 2000 false Chr14: 2167235-2169234 Glycine max
Glyma.14G030000 5.0kb upstream 5.0kb upstream 11406 true Chr14: 2169235-2180640 Glycine max
Glyma.14G030000 5.0kb upstream 5.0kb upstream 5000 false Chr14: 2175641-2180640 Glycine max
Glyma.14G030000 5.0kb downstream 5.0kb downstream 11406 true Chr14: 2164235-2175640 Glycine max
Glyma.14G030000 5.0kb downstream 5.0kb downstream 5000 false Chr14: 2164235-2169234 Glycine max
Glyma.14G030000 10.0kb upstream 10.0kb upstream 16406 true Chr14: 2169235-2185640 Glycine max
Glyma.14G030000 10.0kb upstream 10.0kb upstream 10000 false Chr14: 2175641-2185640 Glycine max
Glyma.14G030000 10.0kb downstream 10.0kb downstream 16406 true Chr14: 2159235-2175640 Glycine max
Glyma.14G030000 10.0kb downstream 10.0kb downstream 10000 false Chr14: 2159235-2169234 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311777 5265 Fabidae View MSA
124065188 5270 Rosid View MSA
123743909 5271 Pentapetalae View MSA
122789445 5272 Eudicot View MSA
122045327 5273 Angiosperm View MSA
121348548 5274 Embryophyte View MSA
123380909 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.39856 0.0 22.6724    
cufflinks 5.88696 0.0 16.2785    
cufflinks 5.49337 0.0 15.2364    
cufflinks 4.66979 0.0 13.1818   Low
cufflinks 16.9244 0.0 45.2641   High
cufflinks 23.2359 0.0 62.9864 High High
cufflinks 9.75596 0.0 26.1771    
cufflinks 6.64115 0.0 18.1591    
cufflinks 9.37355 0.0 25.1749    
cufflinks 4.587        
cufflinks 8.64     High  
cufflinks 4.045        
cufflinks 12.92     High High
cufflinks 16.831     High High
cufflinks 7.152     High  
cufflinks 2.563       Low
cufflinks 6.687     High  
cufflinks 3.626        
cufflinks 3.604        
cufflinks 1.95       Low
cufflinks 5.821     High  
cufflinks 2.149       Low
cufflinks 3.968        
cufflinks 5.912        
cufflinks 2.255       Low
cufflinks 7.055     High  

0 Strain