Gene : Glyma.13G357200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10744:SF7 - 30S RIBOSOMAL PROTEIN S17, CHLOROPLASTIC Genomic Order:  3572
Name:  ? Glyma.13G357200 Secondary Identifier:  ? PAC:30505955
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G357200 0.5kb upstream 0.5kb upstream 2496 true Chr13: 44520751-44523246 Glycine max
Glyma.13G357200 0.5kb upstream 0.5kb upstream 500 false Chr13: 44522747-44523246 Glycine max
Glyma.13G357200 0.5kb downstream 0.5kb downstream 2496 true Chr13: 44520251-44522746 Glycine max
Glyma.13G357200 0.5kb downstream 0.5kb downstream 500 false Chr13: 44520251-44520750 Glycine max
Glyma.13G357200 1.0kb upstream 1.0kb upstream 2996 true Chr13: 44520751-44523746 Glycine max
Glyma.13G357200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 44522747-44523746 Glycine max
Glyma.13G357200 1.0kb downstream 1.0kb downstream 2996 true Chr13: 44519751-44522746 Glycine max
Glyma.13G357200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 44519751-44520750 Glycine max
Glyma.13G357200 2.0kb upstream 2.0kb upstream 3996 true Chr13: 44520751-44524746 Glycine max
Glyma.13G357200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 44522747-44524746 Glycine max
Glyma.13G357200 2.0kb downstream 2.0kb downstream 3996 true Chr13: 44518751-44522746 Glycine max
Glyma.13G357200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 44518751-44520750 Glycine max
Glyma.13G357200 5.0kb upstream 5.0kb upstream 6996 true Chr13: 44520751-44527746 Glycine max
Glyma.13G357200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 44522747-44527746 Glycine max
Glyma.13G357200 5.0kb downstream 5.0kb downstream 6996 true Chr13: 44515751-44522746 Glycine max
Glyma.13G357200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 44515751-44520750 Glycine max
Glyma.13G357200 10.0kb upstream 10.0kb upstream 11996 true Chr13: 44520751-44532746 Glycine max
Glyma.13G357200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 44522747-44532746 Glycine max
Glyma.13G357200 10.0kb downstream 10.0kb downstream 11996 true Chr13: 44510751-44522746 Glycine max
Glyma.13G357200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 44510751-44520750 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313138 5265 Fabidae View MSA
124063542 5270 Rosid View MSA
123744369 5271 Pentapetalae View MSA
122786157 5272 Eudicot View MSA
122045320 5273 Angiosperm View MSA
121347348 5274 Embryophyte View MSA
123424165 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.3067 0.0 76.358 High High
cufflinks 27.6343 0.0 74.4718 High High
cufflinks 6.72846 0.0 18.8183    
cufflinks 8.03536 0.0 22.124    
cufflinks 6.59028 0.0 18.468    
cufflinks 3.77482 0.0 11.3021   Low
cufflinks 20.583 0.0 54.9675    
cufflinks 10.1776 0.0 27.582    
cufflinks 4.12416 0.0 12.2108   Low
cufflinks 13.62     High  
cufflinks 0.587       Low
cufflinks 6.438        
cufflinks 3.072        
cufflinks 3.851        
cufflinks 1.277        
cufflinks 72.526     High High
cufflinks 0.615       Low
cufflinks 7.734     High  
cufflinks 19.822     High  
cufflinks 88.327     High High
cufflinks 0.619       Low
cufflinks 70.521     High High
cufflinks 62.382     High High
cufflinks 0.586       Low
cufflinks 74.897     High High
cufflinks 0.973        

0 Strain